SMTL ID : 7zwd.1

Structure of SNAPc containing Pol II pre-initiation complex bound to U5 snRNA promoter (CC)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
11 x ZN: ZINC ION(Non-covalent)
1 x MG: MAGNESIUM ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Rengachari, S. et al., Structural basis of SNAPc-dependent snRNA transcription initiation by RNA polymerase II. Nat.Struct.Mol.Biol. (2022)
Release Date
2022-11-30
Peptides
DNA-directed RNA polymerase subunit: A
DNA-directed RNA polymerase subunit beta: B
DNA-directed RNA polymerase II subunit RPB3: C
RNA polymerase II subunit D: D
DNA-directed RNA polymerase II subunit E: E
DNA-directed RNA polymerase II subunit F: F
DNA-directed RNA polymerase II subunit RPB7: G
DNA-directed RNA polymerases I, II, and III subunit RPABC3: H
DNA-directed RNA polymerase II subunit RPB9: I
DNA-directed RNA polymerases I, II, and III subunit RPABC5: J
RNA polymerase II subunit J: K
RNA polymerase II subunit K: L
Transcription initiation factor IIB: M
TATA-box-binding protein: O
General transcription factor IIF subunit 1: P
General transcription factor IIF subunit 2: Q
Transcription initiation factor IIA subunit 1: S
Transcription initiation factor IIA subunit 2: T
snRNA-activating protein complex subunit 1: U
snRNA-activating protein complex subunit 3: V
snRNA-activating protein complex subunit 4: W
snRNA-activating protein complex subunit 5: X
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F
G
G
H
H
I
I
J
J
K
K
L
L
M
M
O
O
P
Q
Q
R
S
U
T
V
U
a
V
b
W
c
X
d

DNA-directed RNA polymerase subunit

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase II subunit RPB3

RNA polymerase II subunit D

DNA-directed RNA polymerase II subunit E

DNA-directed RNA polymerase II subunit F

DNA-directed RNA polymerase II subunit RPB7

DNA-directed RNA polymerases I, II, and III subunit RPABC3

DNA-directed RNA polymerase II subunit RPB9

DNA-directed RNA polymerases I, II, and III subunit RPABC5

RNA polymerase II subunit J

RNA polymerase II subunit K

Transcription initiation factor IIB

TATA-box-binding protein

General transcription factor IIF subunit 1

General transcription factor IIF subunit 2

Transcription initiation factor IIA subunit 1

Transcription initiation factor IIA subunit 2

snRNA-activating protein complex subunit 1

snRNA-activating protein complex subunit 3

snRNA-activating protein complex subunit 4

snRNA-activating protein complex subunit 5

Related Entries With Identical Sequence

2c35.1 | 2c35.2 | 2c35.3 | 2c35.4 | 2f3i.1 | 5flm.1 | 5fur.1 | 5iy6.1 | 5iy7.1 | 5iy8.1 | 5iy9.1 | 5iya.1 | 5iyb.1 | 5iyc.1 | 5iyd.1 | 5oik.1 | 6drd.1 | 6exv.1 | 6gmh.1 | 6gml.1 | 6mzd.1 | 6mzl.1 | 6mzm.1 | 6o9l.1 | 6ted.1 | 6xre.1 | 7a6h.1 | 7ae1.1 | 7ae3.1 | 7aea.1  more...