- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.62 Å
- Oligo State
- hetero-4-4-mer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 4 x ZDC: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid(Post Translational Modification)
ZDC.3: 14 residues within 4Å:- Chain A: N.21, S.22, S.23, E.95, D.96, D.99, D.101, D.104
- Chain B: K.1, K.2, L.4
- Chain C: G.114
- Ligands: CA.1, CA.2
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:S.23, A:D.99, A:D.104, C:G.114
- Water bridges: A:S.22
ZDC.6: 14 residues within 4Å:- Chain A: G.114
- Chain C: N.21, S.22, S.23, E.95, D.96, D.99, D.101, D.104
- Chain D: K.1, K.2, L.4
- Ligands: CA.4, CA.5
5 PLIP interactions:1 interactions with chain A, 4 interactions with chain C- Hydrogen bonds: A:G.114, C:S.23, C:D.99, C:D.104
- Water bridges: C:S.22
ZDC.9: 13 residues within 4Å:- Chain E: N.21, S.22, S.23, E.95, D.96, D.99, D.101, D.104
- Chain F: K.1, K.2
- Chain G: G.114
- Ligands: CA.7, CA.8
6 PLIP interactions:5 interactions with chain E, 1 interactions with chain G- Hydrogen bonds: E:S.23, E:D.99, E:D.104, E:D.104, G:G.114
- Water bridges: E:S.22
ZDC.12: 13 residues within 4Å:- Chain E: G.114
- Chain G: N.21, S.22, S.23, E.95, D.96, D.99, D.101, D.104
- Chain H: K.1, K.2
- Ligands: CA.10, CA.11
6 PLIP interactions:5 interactions with chain G, 1 interactions with chain E- Hydrogen bonds: G:S.23, G:D.99, G:D.104, G:D.104, E:G.114
- Water bridges: G:S.22
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Personne, H. et al., To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide. J.Med.Chem. (2023)
- Release Date
- 2023-05-31
- Peptides
- Fucose-binding lectin PA-IIL: ACEG
Fucosylated mixed-chirality linear peptide FHP30: BDFH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
BG
BB
CD
CF
DH
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.62 Å
- Oligo State
- hetero-4-4-mer
- Ligands
- 8 x CA: CALCIUM ION(Non-covalent)
- 4 x ZDC: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Personne, H. et al., To Fold or Not to Fold: Diastereomeric Optimization of an alpha-Helical Antimicrobial Peptide. J.Med.Chem. (2023)
- Release Date
- 2023-05-31
- Peptides
- Fucose-binding lectin PA-IIL: ACEG
Fucosylated mixed-chirality linear peptide FHP30: BDFH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
BG
BB
CD
CF
DH
D