- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-1-3-1-1-2-mer
- Ligands
- 3 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 4 residues within 4Å:- Chain B: T.52, R.215
- Chain C: R.169
- Ligands: AGS.1
1 PLIP interactions:1 interactions with chain B- Metal complexes: B:T.52
MG.5: 4 residues within 4Å:- Chain C: K.51, T.52
- Chain D: R.169
- Ligands: AGS.4
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:T.52
MG.8: 5 residues within 4Å:- Chain D: K.51, T.52, R.215
- Chain E: E.133
- Ligands: AGS.7
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:T.52
- 4 x ZN: ZINC ION(Non-covalent)
ZN.3: 6 residues within 4Å:- Chain B: C.64, E.65, C.73, G.74, C.76, C.79
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:C.64, B:C.73, B:C.76, B:C.79
ZN.6: 7 residues within 4Å:- Chain C: C.64, E.65, C.73, G.74, V.75, C.76, C.79
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:C.64, C:C.73, C:C.76, C:C.79
ZN.9: 8 residues within 4Å:- Chain D: C.64, E.65, T.66, C.73, G.74, V.75, C.76, C.79
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:C.64, D:C.73, D:C.76, D:C.79
ZN.10: 9 residues within 4Å:- Chain E: C.50, Q.51, Q.52, S.58, C.59, G.60, H.61, C.62, C.65
4 PLIP interactions:4 interactions with chain E- Metal complexes: E:C.50, E:C.59, E:C.62, E:C.65
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Xu, Z.Q. et al., Structural characterisation of the complete cycle of sliding clamp loading in Escherichia coli. Nat Commun (2024)
- Release Date
- 2024-03-27
- Peptides
- DNA polymerase III subunit delta: A
DNA polymerase III subunit tau: BCD
DNA polymerase III subunit delta': E
DNA polymerase III subunit psi: F
Beta sliding clamp: GH - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
HH
I
SMTL ID : 8giz.1
E. coli clamp loader with open clamp
DNA polymerase III subunit delta
DNA polymerase III subunit tau
DNA polymerase III subunit delta'
DNA polymerase III subunit psi
Beta sliding clamp
Toggle Identical (GH)Related Entries With Identical Sequence
1a5t.1 | 1jqj.1 | 1jqj.2 | 1jqj.3 | 1jqj.4 | 1jqj.5 | 1jr3.1 | 1mmi.1 | 1ok7.1 | 1unn.1 | 1xxh.1 | 1xxh.2 | 1xxi.1 | 1xxi.2 | 2pol.1 | 3bep.1 | 3d1e.1 | 3d1f.1 | 3d1g.1 | 3glf.1 | 3glf.2 | 3glg.1 | 3glg.2 | 3glh.1 | 3glh.2 | 3glh.3 | 3gli.1 | 3gli.2 | 3q4j.1 | 3q4j.2 more...less...3q4j.3 | 3q4k.1 | 3qsb.1 | 4k3k.1 | 4k3l.1 | 4k3m.1 | 4k3o.1 | 4k3p.1 | 4k3q.1 | 4k3r.1 | 4k3s.1 | 4mjp.1 | 4mjq.1 | 4mjr.1 | 4n94.1 | 4n95.1 | 4n96.1 | 4n97.1 | 4n98.1 | 4n99.1 | 4n9a.1 | 4ovf.1 | 4ovg.1 | 4ovh.1 | 4pnu.1 | 4pnv.1 | 4pnw.1 | 5fku.1 | 5fkv.1 | 5fkw.1 | 5m1s.1 | 8giy.1 | 8gj0.1 | 8gj1.1 | 8gj2.1 | 8gj3.1 | 8val.1 | 8van.1 | 8vaq.1 | 8var.1 | 8vas.1 | 8vat.1