SMTL ID : 8gls.1

Complex of human cystic fibrosis transmembrane conductance regulator (CFTR) and Z1834339853

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: K.464, T.465, Q.493 Ligands: ATP.3 No protein-ligand interaction detected (PLIP) MG.2: 6 residues within 4Å: Chain A: S.1251, Q.1291, D.1370, Q.1371, H.1402 Ligands: ATP.4 No protein-ligand interaction detected (PLIP)

2 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.3: 15 residues within 4Å: Chain A: W.401, V.440, T.460, G.461, G.463, K.464, T.465, S.466, Q.493, F.1331, C.1344, V.1345, S.1347, G.1349 Ligands: MG.1 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:G.461, A:G.463, A:K.464, A:T.465, A:T.465, A:T.465, A:S.466, A:Q.493, A:S.1347, A:G.1349 Salt bridges: A:K.464, A:K.464 pi-Stacking: A:W.401, A:W.401 ATP.4: 18 residues within 4Å: Chain A: K.532, I.546, T.547, S.549, G.550, G.551, Q.552, N.965, Y.1219, T.1246, G.1247, G.1249, K.1250, S.1251, T.1252, Q.1291, H.1402 Ligands: MG.2 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:K.532, A:K.532, A:S.549, A:G.550, A:G.551, A:Q.552, A:N.965, A:T.1246, A:G.1247, A:G.1249, A:K.1250, A:S.1251, A:T.1252, A:T.1252, A:Q.1291 Salt bridges: A:K.1250, A:K.1250, A:H.1402

5 x POV: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate(Non-functional Binders)(Non-covalent)

POV.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) POV.6: 1 residues within 4Å: Chain A: L.227 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.227 POV.7: 3 residues within 4Å: Chain A: Y.362, L.365, G.366 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.362, A:L.365 POV.8: 2 residues within 4Å: Chain A: I.231, Y.362 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.231 POV.9: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x ZRH: (2S)-1-(3-amino-6-fluoro-1H-indazol-1-yl)-2-methyl-3-phenoxypropan-1-one

ZRH.10: 11 residues within 4Å: Chain A: L.233, F.236, Q.237, F.305, S.308, A.309, F.312, F.316, M.929, G.930, F.931 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.233, A:A.309, A:F.312, A:F.931, A:F.931 Hydrogen bonds: A:S.308 pi-Stacking: A:F.312

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, F. et al., Structure-based discovery of positive and negative CFTR modulators. To Be Published

Release Date

2024-06-26

Peptides

Cystic fibrosis transmembrane conductance regulator: A
human cystic fibrosis transmembrane conductance regulator: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Cystic fibrosis transmembrane conductance regulator

human cystic fibrosis transmembrane conductance regulator

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