SMTL ID : 8h06.1

Cryo-EM structure of SARS-CoV-2 Omicron BA.4/5 RBD in complex with human ACE2 (local refinement)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-mer
Ligands
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhao, Z. et al., Structural basis for receptor binding and broader interspecies receptor recognition of currently circulating Omicron sub-variants. Nat Commun (2023)
Release Date
2023-07-19
Peptides
Processed angiotensin-converting enzyme 2: A
Spike protein S1: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Processed angiotensin-converting enzyme 2

Spike protein S1

Related Entries With Identical Sequence

6lzg.1 | 7drv.1 | 7drv.2 | 7lo4.1 | 7pki.1 | 7wbl.1 | 7wbp.1 | 7wbq.1 | 7wbq.2 | 7xaz.1 | 7xaz.2 | 7xb0.1 | 7xb1.1 | 7xch.1 | 7xci.1 | 7xcp.1 | 7y9z.1 | 7ya0.1 | 7ya1.1 | 7yhw.1 | 7yj3.1 | 8h5c.1