SMTL ID : 8oip.1

28S mammalian mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
1 x A- A- U- G- A- G- A- C- A: mRNA(Non-covalent)
127 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
1 x SPM: SPERMINE(Non-functional Binders)
1 x SPD: SPERMIDINE(Non-functional Binders)
11 x K: POTASSIUM ION(Non-functional Binders)(Non-covalent)
1 x ZN: ZINC ION(Non-covalent)
2 x FS2: FE-S-O HYBRID CLUSTER(Non-covalent)
1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Saurer, M. et al., Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science (2023)
Release Date
2023-05-24
Peptides
39S ribosomal protein L19, mitochondrial: A
bL31m: B
28S ribosomal protein S35, mitochondrial isoform 1: D
Mitochondrial ribosomal protein S24: E
Aurora kinase A interacting protein 1: F
bS6m,Mitochondrial ribosomal protein S6: G
Mitochondrial ribosomal protein S7: H
Mitochondrial ribosomal protein S10: J
Mitochondrial ribosomal protein S12: K
Mitochondrial ribosomal protein S14: L
28S ribosomal protein S15, mitochondrial: M
28S ribosomal protein S16, mitochondrial: N
uS17m: O
28S ribosomal protein S18b, mitochondrial: P
Mitochondrial ribosomal protein S18C: Q
28S ribosomal protein S21, mitochondrial: R
Mitochondrial ribosomal protein S22: S
mS23: T
Mitochondrial ribosomal protein S25: U
Mitochondrial ribosomal protein S26: V
Mitochondrial ribosomal protein S27: W
Mitoribosomal protein ms28, mrps28: X
Death associated protein 3: Y
28S ribosomal protein S31, mitochondrial: Z
Mitochondrial ribosomal protein S33: 0
Peptide chain release factor 1, mitochondrial: 1
Mitochondrial ribosomal protein S2: 2
Coiled-coil-helix-coiled-coil-helix domain containing 1: 3
28S ribosomal protein S5, mitochondrial isoform X2: 4
mS39: 5
uS9m: 6
Mitochondrial ribosomal protein S11: 7
Mitochondrial ribosomal protein S34: 8
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
BX
B
Bd
D
AB
E
AC
F
AD
G
AE
H
AF
J
AH
K
AJ
L
AK
M
AL
N
AM
O
AN
P
AO
Q
AP
R
AQ
S
AR
T
AS
U
AT
V
AU
W
AV
X
AW
Y
AX
Z
AY
0
AZ
1
Aa
2
Ab
3
Ac
4
Ad
5
Ae
6
Ag
7
Ai
8
Aj

39S ribosomal protein L19, mitochondrial

bL31m

28S ribosomal protein S35, mitochondrial isoform 1

Mitochondrial ribosomal protein S24

Aurora kinase A interacting protein 1

bS6m,Mitochondrial ribosomal protein S6

Mitochondrial ribosomal protein S7

Mitochondrial ribosomal protein S10

Mitochondrial ribosomal protein S12

Mitochondrial ribosomal protein S14

28S ribosomal protein S15, mitochondrial

28S ribosomal protein S16, mitochondrial

uS17m

28S ribosomal protein S18b, mitochondrial

Mitochondrial ribosomal protein S18C

28S ribosomal protein S21, mitochondrial

Mitochondrial ribosomal protein S22

mS23

Mitochondrial ribosomal protein S25

Mitochondrial ribosomal protein S26

Mitochondrial ribosomal protein S27

Mitoribosomal protein ms28, mrps28

Death associated protein 3

28S ribosomal protein S31, mitochondrial

Mitochondrial ribosomal protein S33

Peptide chain release factor 1, mitochondrial

Mitochondrial ribosomal protein S2

Coiled-coil-helix-coiled-coil-helix domain containing 1

28S ribosomal protein S5, mitochondrial isoform X2

mS39

uS9m

Mitochondrial ribosomal protein S11

Mitochondrial ribosomal protein S34

Related Entries With Identical Sequence

4v19.1 | 5aj3.1 | 6gaz.1 | 6gb2.1 | 7nsh.1 | 7nsj.5 | 7nsj.51 | 7nsj.52 | 7nsj.53 | 7nsj.55 | 7nsj.56 | 7nsj.57 | 7nsj.59 | 7nsj.60 | 7nsj.62 | 7nsj.63 | 7nsj.64 | 7nsj.65 | 7nsj.66 | 7nsj.67 | 7nsj.68 | 7nsj.69 | 7nsj.71 | 7nsj.72 | 7nsj.77 | 7nsj.78 | 7nsj.80 | 8oin.30 | 8oin.36 | 8oin.58  more...