- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.62 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 23 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: P.275, G.309, Q.310, V.311
Ligand excluded by PLIPSO4.5: 3 residues within 4Å:- Chain A: V.290, D.291
- Chain C: H.24
Ligand excluded by PLIPSO4.6: 3 residues within 4Å:- Chain A: P.647, L.648
- Chain B: H.243
Ligand excluded by PLIPSO4.7: 3 residues within 4Å:- Chain A: S.674, T.675, A.676
Ligand excluded by PLIPSO4.8: 1 residues within 4Å:- Chain A: H.8
Ligand excluded by PLIPSO4.12: 1 residues within 4Å:- Chain B: R.382
Ligand excluded by PLIPSO4.13: 4 residues within 4Å:- Chain B: N.380, R.382, R.402, V.403
Ligand excluded by PLIPSO4.14: 3 residues within 4Å:- Chain B: S.163, R.164, N.249
Ligand excluded by PLIPSO4.15: 2 residues within 4Å:- Chain B: R.195, L.201
Ligand excluded by PLIPSO4.16: 2 residues within 4Å:- Chain B: P.193, R.195
Ligand excluded by PLIPSO4.17: 4 residues within 4Å:- Chain B: R.173, K.177, D.345, E.346
Ligand excluded by PLIPSO4.18: 1 residues within 4Å:- Chain C: R.382
Ligand excluded by PLIPSO4.19: 3 residues within 4Å:- Chain C: N.380, R.382, R.402
Ligand excluded by PLIPSO4.20: 2 residues within 4Å:- Chain C: P.193, R.195
Ligand excluded by PLIPSO4.21: 3 residues within 4Å:- Chain C: S.163, R.164, N.249
Ligand excluded by PLIPSO4.22: 2 residues within 4Å:- Chain C: R.195, L.201
Ligand excluded by PLIPSO4.23: 4 residues within 4Å:- Chain C: R.173, K.177, D.345, E.346
Ligand excluded by PLIPSO4.24: 3 residues within 4Å:- Chain C: T.317, V.318, D.319
Ligand excluded by PLIPSO4.27: 4 residues within 4Å:- Chain D: P.275, G.309, Q.310, V.311
Ligand excluded by PLIPSO4.28: 4 residues within 4Å:- Chain B: H.24
- Chain D: Q.289, V.290, D.291
Ligand excluded by PLIPSO4.29: 3 residues within 4Å:- Chain C: H.243
- Chain D: P.647, L.648
Ligand excluded by PLIPSO4.30: 3 residues within 4Å:- Chain D: R.718, L.735, S.736
Ligand excluded by PLIPSO4.31: 3 residues within 4Å:- Chain D: H.8, H.9, H.10
Ligand excluded by PLIP- 6 x VXC: 4-bromanylbenzenesulfonic acid(Non-covalent)
VXC.9: 10 residues within 4Å:- Chain A: G.83, G.84, V.86, M.89, L.130, G.131, P.156, E.157, L.160
- Ligands: GOL.1
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.86, A:L.160
VXC.10: 10 residues within 4Å:- Chain A: H.7, M.46, N.47, E.48, I.51, D.85, T.88, M.89, T.103
- Ligands: VXC.11
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.51, A:T.88
- Salt bridges: A:H.7
VXC.11: 7 residues within 4Å:- Chain A: T.88, M.89, A.92, D.96, V.100, T.103
- Ligands: VXC.10
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:A.92, A:V.100, A:V.100
- Hydrogen bonds: A:T.88
VXC.32: 9 residues within 4Å:- Chain D: G.83, G.84, V.86, M.89, G.131, P.156, E.157, L.160
- Ligands: GOL.25
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:V.86, D:E.157, D:L.160
- Hydrogen bonds: D:E.157
VXC.33: 10 residues within 4Å:- Chain D: H.7, M.46, N.47, E.48, I.51, D.85, T.88, M.89, T.103
- Ligands: VXC.34
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:I.51, D:T.88
- Hydrogen bonds: D:T.103
- Salt bridges: D:H.7
VXC.34: 8 residues within 4Å:- Chain D: T.88, M.89, A.92, D.96, D.99, V.100, T.103
- Ligands: VXC.33
4 PLIP interactions:4 interactions with chain D- Hydrophobic interactions: D:A.92, D:V.100, D:V.100
- Hydrogen bonds: D:D.99
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dalwani, S. et al., Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them. Acta Crystallogr D Struct Biol (2024)
- Release Date
- 2024-01-24
- Peptides
- 3-hydroxyacyl-CoA dehydrogenase: AD
Putative acyltransferase Rv0859: BC - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BD
AB
DC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.62 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 23 x SO4: SULFATE ION(Non-functional Binders)
- 6 x VXC: 4-bromanylbenzenesulfonic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dalwani, S. et al., Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them. Acta Crystallogr D Struct Biol (2024)
- Release Date
- 2024-01-24
- Peptides
- 3-hydroxyacyl-CoA dehydrogenase: AD
Putative acyltransferase Rv0859: BC - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BD
AB
DC
C