- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.78 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 17 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: P.275, G.309, Q.310, V.311
Ligand excluded by PLIPSO4.3: 4 residues within 4Å:- Chain A: Q.289, V.290, D.291
- Chain C: H.24
Ligand excluded by PLIPSO4.4: 3 residues within 4Å:- Chain A: P.647, L.648
- Chain D: H.243
Ligand excluded by PLIPSO4.5: 2 residues within 4Å:- Chain A: H.8, H.9
Ligand excluded by PLIPSO4.11: 4 residues within 4Å:- Chain B: P.275, G.309, Q.310, V.311
Ligand excluded by PLIPSO4.12: 3 residues within 4Å:- Chain B: V.290, D.291
- Chain D: H.24
Ligand excluded by PLIPSO4.16: 3 residues within 4Å:- Chain C: S.163, R.164, N.249
Ligand excluded by PLIPSO4.17: 1 residues within 4Å:- Chain C: R.382
Ligand excluded by PLIPSO4.18: 3 residues within 4Å:- Chain B: P.647, L.648
- Chain C: H.243
Ligand excluded by PLIPSO4.19: 3 residues within 4Å:- Chain C: N.380, R.382, R.402
Ligand excluded by PLIPSO4.20: 2 residues within 4Å:- Chain C: R.195, L.201
Ligand excluded by PLIPSO4.21: 2 residues within 4Å:- Chain C: P.193, R.195
Ligand excluded by PLIPSO4.22: 4 residues within 4Å:- Chain D: S.163, R.164, N.249, V.251
Ligand excluded by PLIPSO4.23: 2 residues within 4Å:- Chain D: R.195, L.201
Ligand excluded by PLIPSO4.24: 4 residues within 4Å:- Chain D: N.380, R.382, R.402, V.403
Ligand excluded by PLIPSO4.25: 1 residues within 4Å:- Chain D: R.382
Ligand excluded by PLIPSO4.26: 2 residues within 4Å:- Chain D: P.193, R.195
Ligand excluded by PLIP- 7 x VWI: 4-nitrobenzenesulfonic acid(Non-covalent)
VWI.6: 9 residues within 4Å:- Chain A: T.458, G.524, S.528, R.529, G.532, V.535, M.576, I.579, T.583
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:I.579, A:I.579
VWI.7: 9 residues within 4Å:- Chain A: T.88, M.89, A.92, D.96, D.99, V.100, T.103, F.303
- Ligands: VWI.9
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:A.92, A:V.100
VWI.8: 8 residues within 4Å:- Chain A: G.83, G.84, L.130, G.131, P.156, E.157, L.160, R.191
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:P.156, A:L.160
- Hydrogen bonds: A:G.84, A:G.132
VWI.9: 9 residues within 4Å:- Chain A: H.7, M.46, N.47, E.48, D.85, M.89, T.103
- Ligands: GOL.1, VWI.7
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:T.103
- Hydrogen bonds: A:E.48
- Salt bridges: A:H.7
VWI.13: 8 residues within 4Å:- Chain B: T.88, M.89, A.92, D.96, D.99, V.100, T.103, F.303
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:T.88, B:A.92, B:V.100
- Hydrogen bonds: B:D.99
VWI.14: 8 residues within 4Å:- Chain B: G.83, L.130, G.131, G.132, P.156, E.157, L.160, R.191
5 PLIP interactions:5 interactions with chain B- Hydrophobic interactions: B:L.130, B:L.160
- Hydrogen bonds: B:G.84, B:G.132, B:P.156
VWI.15: 6 residues within 4Å:- Chain B: G.524, S.528, R.529, M.576, I.579, T.583
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:I.579, B:I.579
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dalwani, S. et al., Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them. Acta Crystallogr D Struct Biol (2024)
- Release Date
- 2024-01-24
- Peptides
- 3-hydroxyacyl-CoA dehydrogenase: AB
Putative acyltransferase Rv0859: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.78 Å
- Oligo State
- hetero-2-2-mer
- Ligands
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 17 x SO4: SULFATE ION(Non-functional Binders)
- 7 x VWI: 4-nitrobenzenesulfonic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dalwani, S. et al., Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them. Acta Crystallogr D Struct Biol (2024)
- Release Date
- 2024-01-24
- Peptides
- 3-hydroxyacyl-CoA dehydrogenase: AB
Putative acyltransferase Rv0859: CD - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D