SMTL ID : 8p2q.1

Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-OH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x WRT: TbXo4-OH(Non-covalent)

WRT.1: 6 residues within 4Å: Chain A: W.80, W.81, L.93, D.119, G.120, N.121 10 PLIP interactions: 10 interactions with chain A, Hydrogen bonds: A:N.121 Water bridges: A:G.120, A:G.120, A:N.121 Salt bridges: A:D.119, A:D.119, A:D.119 pi-Cation interactions: A:W.80, A:W.80 Metal complexes: A:D.119

5 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 6 residues within 4Å: Chain A: S.42, L.43, G.44, V.138, Q.139, I.142 Ligand excluded by PLIP CL.3: 5 residues within 4Å: Chain A: N.83, G.85, R.86, T.87, S.90 Ligand excluded by PLIP CL.4: 7 residues within 4Å: Chain A: F.21, A.29, R.32, H.33, S.104, D.105, I.106 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain A: Y.41, G.122 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: F.52, R.132 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.7: 7 residues within 4Å: Chain A: S.78, C.82, N.83, D.84, T.87, S.90, R.91 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.78, A:S.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Roux, A. et al., Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network. Chemistry (2024)

Release Date

2024-06-05

Peptides

Lysozyme C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme C

Related Entries With Identical Sequence