SMTL ID : 8pv5.1

Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
2 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)
3 x MG: MAGNESIUM ION(Non-covalent)
5 x ZN: ZINC ION(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Thoms, M. et al., Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation. Embo Rep. (2023)
Release Date
2023-11-15
Peptides
Large ribosomal subunit protein uL10: D
Nucleolar GTP-binding protein 1: E
Ribosome biogenesis protein NSA2 homolog: F
Putative GTP binding protein: G
Eukaryotic translation initiation factor 6: H
DUF2423 domain-containing protein: I
Ribosome biogenesis protein RLP24: J
Zinc finger domain-containing protein: K
Nucleolar GTP-binding protein 2: L
Ribosome production factor 2 homolog: M
Ribosome biogenesis regulatory protein: N
Ribosome assembly protein 4: O
rRNA-processing protein: P
60S ribosomal protein L2-like protein: Q
60S ribosomal protein L3-like protein: R
60S ribosomal protein L4-like protein: S
60S ribosomal protein l5-like protein: T
60S ribosomal protein L6: U
60S ribosomal protein l7-like protein: V
60S ribosomal protein L8: W
60S ribosomal protein l9-like protein: X
Putative ribosomal protein: Y
60S ribosomal protein L12-like protein: Z
60S ribosomal protein L13: 0
60S ribosomal protein L14-like protein: 1
Ribosomal protein L15: 2
60S ribosomal protein L16-like protein: 3
60S ribosomal protein l17-like protein: 4
Ribosomal protein L18-like protein: 5
Ribosomal protein L19: 6
60S ribosomal protein L20: 7
60S ribosomal protein l21-like protein: 8
60S ribosomal protein L22-like protein: 9
60S ribosomal protein l23-like protein: a
60S ribosomal protein L25-like protein: b
60S ribosomal protein L26-like protein: c
60S ribosomal protein L27: d
60S ribosomal protein L28-like protein: e
60S ribosomal protein l30-like protein: f
Putative 60S ribosomal protein: g
60S ribosomal protein L32-like protein: h
60S ribosomal protein l33-like protein: i
Ribosomal protein l34-like protein: j
dolichyl-diphosphooligosaccharide--protein glycotransferase: k
60S ribosomal protein L36: l
Ribosomal protein L37: m
60S ribosomal protein L38-like protein: n
Ribosomal protein eL39: o
60S ribosomal protein L43-like protein: p
Putative 60S ribosomal protein: q
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
D
CF
E
CH
F
CK
G
CL
H
CN
I
CO
J
CQ
K
Cb
L
Cd
M
Cf
N
Cg
O
Ch
P
Cz
Q
LA
R
LB
S
LC
T
LD
U
LE
V
LF
W
LG
X
LH
Y
LJ
Z
LK
0
LL
1
LM
2
LN
3
LO
4
LP
5
LQ
6
LR
7
LS
8
LT
9
LU
a
LV
b
LX
c
LY
d
LZ
e
La
f
Lc
g
Ld
h
Le
i
Lf
j
Lg
k
Lh
l
Li
m
Lj
n
Lk
o
Ll
p
Lp
q
Lq

Large ribosomal subunit protein uL10

Nucleolar GTP-binding protein 1

Ribosome biogenesis protein NSA2 homolog

Putative GTP binding protein

Eukaryotic translation initiation factor 6

DUF2423 domain-containing protein

Ribosome biogenesis protein RLP24

Zinc finger domain-containing protein

Nucleolar GTP-binding protein 2

Ribosome production factor 2 homolog

Ribosome biogenesis regulatory protein

Ribosome assembly protein 4

rRNA-processing protein

60S ribosomal protein L2-like protein

60S ribosomal protein L3-like protein

60S ribosomal protein L4-like protein

60S ribosomal protein l5-like protein

60S ribosomal protein L6

60S ribosomal protein l7-like protein

60S ribosomal protein L8

60S ribosomal protein l9-like protein

Putative ribosomal protein

60S ribosomal protein L12-like protein

60S ribosomal protein L13

60S ribosomal protein L14-like protein

Ribosomal protein L15

60S ribosomal protein L16-like protein

60S ribosomal protein l17-like protein

Ribosomal protein L18-like protein

Ribosomal protein L19

60S ribosomal protein L20

60S ribosomal protein l21-like protein

60S ribosomal protein L22-like protein

60S ribosomal protein l23-like protein

60S ribosomal protein L25-like protein

60S ribosomal protein L26-like protein

60S ribosomal protein L27

60S ribosomal protein L28-like protein

60S ribosomal protein l30-like protein

Putative 60S ribosomal protein

60S ribosomal protein L32-like protein

60S ribosomal protein l33-like protein

Ribosomal protein l34-like protein

dolichyl-diphosphooligosaccharide--protein glycotransferase

60S ribosomal protein L36

Ribosomal protein L37

60S ribosomal protein L38-like protein

Ribosomal protein eL39

60S ribosomal protein L43-like protein

Putative 60S ribosomal protein

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5aff.1 | 7olc.4 | 7olc.5 | 7olc.6 | 7olc.7 | 7olc.8 | 7olc.9 | 7olc.10 | 7olc.13 | 7olc.14 | 7olc.15 | 7olc.16 | 7olc.17 | 7olc.18 | 7olc.19 | 7olc.20 | 7olc.22 | 7olc.23 | 7olc.24 | 7olc.25 | 7olc.27 | 7olc.28 | 7olc.29 | 7olc.30 | 7olc.32 | 7olc.33 | 7olc.34 | 7olc.35 | 7olc.36 | 7olc.38  more...