SMTL ID : 8pwn.1

Structure of A2A adenosine receptor A2AR-StaR2-bRIL, solved at wavelength 2.75 A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x TEP: THEOPHYLLINE(Non-covalent)

TEP.1: 7 residues within 4Å: Chain A: F.177, E.178, M.186, L.354, N.358, M.375, I.379 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.358, A:N.358 pi-Stacking: A:F.177, A:F.177

12 x OLA: OLEIC ACID(Non-covalent)(Non-functional Binders)

OLA.2: 4 residues within 4Å: Chain A: V.139, L.140, M.149, L.150 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.139, A:L.140 Salt bridges: A:H.84 OLA.3: 3 residues within 4Å: Chain A: I.73, T.74, F.79 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.73, A:T.74 Hydrogen bonds: A:T.77 OLA.4: 6 residues within 4Å: Chain A: F.53, F.102, A.106, I.109, I.113, C.137 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.102, A:I.109 OLA.5: 2 residues within 4Å: Chain A: P.371, W.373 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:W.373 OLA.6: 1 residues within 4Å: Ligands: OLA.13 No protein-ligand interaction detected (PLIP) OLA.7: 2 residues within 4Å: Ligands: OLA.10, CLR.14 No protein-ligand interaction detected (PLIP) OLA.8: 6 residues within 4Å: Chain A: Y.52, V.55, L.63, I.134, W.138 Ligands: OLA.9 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.52, A:V.55, A:L.63, A:I.134, A:I.134, A:W.138, A:W.138, A:W.138 OLA.9: 7 residues within 4Å: Chain A: C.37, V.40, W.41, Y.52, V.55, A.59 Ligands: OLA.8 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.55 OLA.10: 1 residues within 4Å: Ligands: OLA.7 No protein-ligand interaction detected (PLIP) OLA.11: 4 residues within 4Å: Chain A: I.25, T.384, V.388, F.391 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.25, A:T.384, A:V.388, A:F.391 OLA.12: 3 residues within 4Å: Chain A: G.14, Y.376, V.380 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:V.380 OLA.13: 7 residues within 4Å: Chain A: V.66, F.71, T.74, F.79, C.80 Ligands: OLA.6, CLR.14 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.66, A:F.71, A:T.74, A:F.79, A:F.79

3 x CLR: CHOLESTEROL(Non-covalent)

CLR.14: 8 residues within 4Å: Chain A: F.71, A.81, A.82, G.85, F.88, I.89 Ligands: OLA.7, OLA.13 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.71, A:A.81, A:A.82, A:F.88, A:I.89, A:I.89 Hydrogen bonds: A:A.82 CLR.15: 8 residues within 4Å: Chain A: L.352, P.353, I.357, F.360, C.367, S.368, A.370, L.374 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.352, A:P.353, A:I.357, A:F.360, A:L.374 Hydrogen bonds: A:S.368 CLR.16: 5 residues within 4Å: Chain A: I.356, C.359, F.360, F.363, C.364 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.356, A:F.360, A:F.360, A:F.360, A:F.360, A:F.363, A:F.363

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

El Omari, K. et al., Experimental phasing opportunities for macromolecular crystallography at very long wavelengths. Commun Chem (2023)

Release Date

2023-10-25

Peptides

Adenosine receptor A2a,Soluble cytochrome b562: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Adenosine receptor A2a,Soluble cytochrome b562

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