SMTL ID : 8px6.1

Hepatitis B core protein with bound SLLGRM-dimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

2 x SER- LEU- LEU- GLY- ARG: SLLGRM-dimer(Non-covalent)

SER-LEU-LEU-GLY-ARG.1: 9 residues within 4Å: Chain A: N.75, E.77, S.81 Chain B: N.75, L.76, E.77, D.78, S.81, L.84 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:N.75, B:E.77, A:E.77, A:S.81 Hydrophobic interactions: A:N.75 SER-LEU-LEU-GLY-ARG.2: 9 residues within 4Å: Chain C: N.75, L.76, D.78, S.81 Chain D: N.75, L.76, E.77, D.78, S.81 7 PLIP interactions: 4 interactions with chain D, 3 interactions with chain C Hydrophobic interactions: D:L.76, D:D.78 Hydrogen bonds: D:E.77, D:S.81, C:N.75, C:N.75, C:S.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khayenko, V. et al., Peptide dimers aggregate Hepatitis B core proteins in live cells. To Be Published

Release Date

2024-07-31

Peptides

External core antigen: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

C
C

D
D

External core antigen

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