SMTL ID : 8r00.1

Crystal structure of the human PXR ligand-binding domain in complex with furanodienone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x XFQ: furanodienone

XFQ.1: 8 residues within 4Å: Chain A: M.125, M.128, S.129, Q.167, F.170, W.181, Y.188, M.205 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.170, A:W.181, A:W.181, A:W.181, A:Y.188 Hydrogen bonds: A:Q.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., An abundant ginger compound furanodienone alleviates gut inflammation via the xenobiotic nuclear receptor PXR in mice. Nat Commun (2025)

Release Date

2025-04-16

Peptides

Nuclear receptor subfamily 1 group I member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor subfamily 1 group I member 2

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