SMTL ID : 8rg0.1

Structure of human eIF3 core from closed 48S translation initiation complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.1: 2 residues within 4Å: Chain G: G.925, A.1011 No protein-ligand interaction detected (PLIP)

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain N: C.23, C.26, C.74, C.77 4 PLIP interactions: 4 interactions with chain N Metal complexes: N:C.23, N:C.26, N:C.74, N:C.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petrychenko, V. et al., Structural basis for translational control by the human 48S initiation complex. Nat.Struct.Mol.Biol. (2024)

Release Date

2024-08-14

Peptides

Eukaryotic translation initiation factor 3 subunit K: A
Eukaryotic translation initiation factor 3 subunit F: B
Eukaryotic translation initiation factor 3 subunit L: C
Eukaryotic translation initiation factor 3 subunit M: D
Eukaryotic translation initiation factor 3 subunit H: F
40S ribosomal protein S27: H
40S ribosomal protein S13: I
40S ribosomal protein S17: J
40S ribosomal protein SA: K
40S ribosomal protein S3a: L
40S ribosomal protein S14: M
40S ribosomal protein S26: N
40S ribosomal protein S28: O
Eukaryotic translation initiation factor 3 subunit A: P
Eukaryotic translation initiation factor 3 subunit E: Q
Eukaryotic translation initiation factor 3 subunit D: R
Eukaryotic translation initiation factor 3 subunit C: S

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
3

B
4

C
5

D
6

F
8

H
H

I
I

J
M

K
N

L
O

M
P

N
Q

O
n

P
u

Q
v

R
x

S
y

Eukaryotic translation initiation factor 3 subunit K

Eukaryotic translation initiation factor 3 subunit F

Eukaryotic translation initiation factor 3 subunit L

Eukaryotic translation initiation factor 3 subunit M

Eukaryotic translation initiation factor 3 subunit H

40S ribosomal protein S27

40S ribosomal protein S13

40S ribosomal protein S17

40S ribosomal protein SA

40S ribosomal protein S3a

40S ribosomal protein S14

40S ribosomal protein S26

40S ribosomal protein S28

Eukaryotic translation initiation factor 3 subunit A

Eukaryotic translation initiation factor 3 subunit E

Eukaryotic translation initiation factor 3 subunit D

Eukaryotic translation initiation factor 3 subunit C

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