SMTL ID : 8rsu.1

Rap from bacteriophage Phi3T in presence of pheromone RRGHTA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ARG- ARG- GLY- HIS- THR- ALA: Pheromone RRGHTA(Non-covalent)

ARG-ARG-GLY-HIS-THR-ALA.1: 28 residues within 4Å: Chain A: Y.67, Y.144, E.148, Y.151, H.152, K.154, Q.182, F.185, V.186, L.189, D.193, R.218, L.219, S.222, Y.225, N.226, L.229, Y.251, R.261, D.264, L.267, M.268, M.301, M.304, M.332, S.334, D.335, D.338 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:Y.151, A:Y.151, A:V.186, A:L.189 Hydrogen bonds: A:E.148, A:E.148, A:Y.151, A:Y.151, A:Y.151, A:Q.182, A:S.222, A:Y.225, A:N.226, A:N.226, A:R.261, A:D.264, A:S.334, A:D.335 Water bridges: A:D.338 Salt bridges: A:D.193, A:R.218, A:D.264, A:D.335

1 x 01: Glycerol ethoxylate

01.2: 8 residues within 4Å: Chain A: Q.113, Y.114, E.115, E.299, I.300, Y.326, L.329, K.330 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.299, A:Y.326, A:K.330

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Felipe-Ruiz, A. et al., Extracellular proteolysis of tandemly duplicated pheromone propeptides affords additional complexity to bacterial quorum sensing. Plos Biol. (2024)

Release Date

2024-07-24

Peptides

Rap3T: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Rap3T

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