SMTL ID : 8ve0.1

Human transthyretin covalently modified with A2-derived stilbene in the compressed conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

2 x 1WZ: 3-(dimethylamino)-5-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzoic acid(Covalent)

1WZ.1: 11 residues within 4Å: Chain B: K.16, L.18, A.109, S.118, T.119, T.120 Chain D: K.16, A.109, S.118, T.119, T.120 7 PLIP interactions: 2 interactions with chain D, 5 interactions with chain B Hydrophobic interactions: D:A.109, B:K.16, B:L.18, B:A.109 Hydrogen bonds: D:S.118, B:S.118, B:S.118 1WZ.2: 12 residues within 4Å: Chain A: K.16, L.18, A.109, S.118, T.119, T.120 Chain C: K.16, T.107, A.109, S.118, T.119, T.120 8 PLIP interactions: 5 interactions with chain C, 3 interactions with chain A Hydrophobic interactions: C:K.16, C:A.109, C:T.120, A:T.120 Hydrogen bonds: C:S.118, C:S.118, A:S.118 pi-Cation interactions: A:K.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basanta, B. et al., The conformational landscape of human transthyretin revealed by cryo-EM. To Be Published

Release Date

2024-01-31

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Transthyretin

Related Entries With Identical Sequence