SMTL ID : 8ve1.1

Human transthyretin covalently modified with A2-derived stilbene in the canonical conformation

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

2 x 1WZ: 3-(dimethylamino)-5-[(E)-2-(4-hydroxy-3,5-dimethylphenyl)ethenyl]benzoic acid(Covalent)

1WZ.1: 14 residues within 4Å: Chain B: K.16, L.18, T.107, L.111, S.118, T.119, V.122 Chain D: K.16, L.18, A.109, L.111, S.118, T.119, T.120 9 PLIP interactions: 4 interactions with chain B, 5 interactions with chain D Hydrophobic interactions: B:K.16, B:L.18, D:L.18, D:L.18, D:L.111, D:L.111 Hydrogen bonds: B:S.118, B:S.118, D:S.118 1WZ.2: 13 residues within 4Å: Chain A: K.16, L.18, T.107, A.109, L.111, S.118, T.119, T.120 Chain C: K.16, L.18, A.109, L.111, S.118 10 PLIP interactions: 5 interactions with chain A, 5 interactions with chain C Hydrophobic interactions: A:K.16, A:L.18, A:A.109, A:T.120, C:K.16, C:L.111, C:L.111 Hydrogen bonds: A:S.118, C:S.118, C:S.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Basanta, B. et al., The conformational landscape of human transthyretin revealed by cryo-EM. To Be Published

Release Date

2024-06-05

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Transthyretin

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