SMTL ID : 8vl0.1

The crystal structure of wild-type CYP199A4 bound to 4-(2-oxopropyl)benzoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

monomer

Ligands

1 x LVC: 4-(2-oxopropyl)benzoic acid(Non-covalent)

LVC.1: 13 residues within 4Å: Chain A: R.93, S.96, I.98, L.99, F.183, F.186, S.245, S.248, A.249, T.253, V.296, F.299 Ligands: HEM.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.99, A:F.186, A:A.249, A:T.253, A:V.296, A:F.299 Hydrogen bonds: A:S.96, A:S.248, A:S.248 Salt bridges: A:R.93

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.2: 27 residues within 4Å: Chain A: V.81, I.98, L.99, H.106, R.110, L.113, L.117, F.161, L.246, A.249, G.250, T.253, T.254, V.296, F.299, R.301, L.324, G.351, F.352, G.353, V.356, H.357, C.359, V.360, G.361, A.365 Ligands: LVC.1 18 PLIP interactions: 18 interactions with chain A, Hydrophobic interactions: A:I.98, A:L.99, A:L.113, A:L.117, A:F.161, A:L.246, A:A.249, A:T.254, A:F.299, A:L.324, A:F.352, A:V.360 Water bridges: A:H.357 Salt bridges: A:H.106, A:R.110, A:R.301, A:H.357 Metal complexes: A:C.359

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: Y.178, Q.204, N.208, R.244 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, J.H.Z. et al., Selective alpha -Hydroxyketone Formation and Subsequent C-C Bond Cleavage by Cytochrome P450 Monooxygenase Enzymes. Acs Catalysis (2024)

Release Date

2024-05-08

Peptides

Cytochrome P450: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome P450

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