- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.07 Å
- Oligo State
- homo-dimer
- Ligands
- 1 x ZKE: Mevaldyl-Coenzyme A(Non-covalent)
- 1 x COA: COENZYME A(Non-covalent)
COA.2: 25 residues within 4Å:- Chain A: R.11, N.67, E.83, S.85, I.86, A.88, A.89, S.91, Y.92, K.95, N.271, G.367, A.368, R.370, A.371, E.375, I.377, R.379, G.380, H.381, L.384
- Chain B: E.52, N.53
- Ligands: ZKE.1, 01.3
22 PLIP interactions:20 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:A.88, A:A.89, A:I.377, A:L.384
- Hydrogen bonds: A:N.67, A:S.85, A:R.370
- Water bridges: A:R.11, A:R.11, A:R.11, A:R.11, A:S.91, A:Y.92, A:Q.364, A:A.371, A:G.380, A:G.380, B:N.53, B:N.53
- Salt bridges: A:R.11, A:K.95, A:R.379
- 1 x 01: (R)-mevaldehyde
01.3: 14 residues within 4Å:- Chain A: E.83, R.261, T.264, H.265, K.267, G.268, N.271, A.368, L.372
- Chain B: I.213
- Ligands: ZKE.1, COA.2, NAD.5, NAI.6
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.271
- Salt bridges: A:R.261
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
NAD.5: 32 residues within 4Å:- Chain A: E.83, T.264, K.267, H.381, H.385, I.389, V.392, A.415
- Chain B: D.146, L.148, L.149, L.152, V.181, R.182, D.183, A.184, M.185, G.186, A.187, N.188, T.189, N.191, L.214, N.216, D.283, A.286, V.328, G.329, G.330
- Ligands: ZKE.1, 01.3, NAI.6
24 PLIP interactions:22 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:A.187, B:L.214
- Hydrogen bonds: B:D.146, B:L.149, B:D.183, B:D.183, B:A.184, B:M.185, B:G.186, B:A.187, B:N.188, B:N.188, B:T.189, B:T.189, B:T.189, B:N.216, B:N.216, B:G.330
- Water bridges: B:T.189, B:G.329, B:A.331, B:A.331, A:E.82
- Salt bridges: A:H.385
- 1 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
NAI.6: 31 residues within 4Å:- Chain A: E.83, T.264, K.267, H.381, H.385, V.392, A.415
- Chain B: D.146, L.148, L.149, L.152, V.181, R.182, D.183, A.184, M.185, G.186, A.187, N.188, T.189, N.191, L.214, N.216, D.283, A.286, V.328, G.329, G.330
- Ligands: ZKE.1, 01.3, NAD.5
23 PLIP interactions:22 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:A.187, B:L.214
- Hydrogen bonds: B:D.146, B:D.183, B:D.183, B:A.184, B:M.185, B:G.186, B:A.187, B:N.188, B:N.188, B:T.189, B:T.189, B:T.189, B:N.216, B:N.216, B:D.283, B:G.330
- Water bridges: B:G.329, B:G.329, B:A.331, B:A.331
- Salt bridges: A:H.385
- 1 x MEV: (R)-MEVALONATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Purohit, V. et al., pH-dependent reaction triggering in PmHMGR crystals for time-resolved crystallography. Biophys.J. (2024)
- Release Date
- 2024-03-20
- Peptides
- 3-hydroxy-3-methylglutaryl-coenzyme A reductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.07 Å
- Oligo State
- homo-dimer
- Ligands
- 1 x ZKE: Mevaldyl-Coenzyme A(Non-covalent)
- 1 x COA: COENZYME A(Non-covalent)
- 1 x 01: (R)-mevaldehyde
- 1 x SO4: SULFATE ION(Non-functional Binders)
- 1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 1 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)
- 1 x MEV: (R)-MEVALONATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Purohit, V. et al., pH-dependent reaction triggering in PmHMGR crystals for time-resolved crystallography. Biophys.J. (2024)
- Release Date
- 2024-03-20
- Peptides
- 3-hydroxy-3-methylglutaryl-coenzyme A reductase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B