SMTL ID : 9eky.1

(+)ML-SI3 bound TRPML2 in a pre-open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x ZB4: N-{(1S,2S)-2-[4-(2-methoxyphenyl)piperazin-1-yl]cyclohexyl}benzenesulfonamide(Non-covalent)

ZB4.1: 11 residues within 4Å: Chain A: V.417, C.421, A.424, F.457, V.460, N.461, F.494, I.498 Chain D: S.492, I.495, Y.496 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain D Hydrophobic interactions: A:A.424, A:F.457, A:V.460, D:I.495, D:Y.496 ZB4.2: 11 residues within 4Å: Chain A: S.492, I.495, Y.496 Chain B: V.417, C.421, A.424, F.457, V.460, N.461, F.494, I.498 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:A.424, B:F.457, B:V.460, A:I.495, A:Y.496 ZB4.3: 11 residues within 4Å: Chain B: S.492, I.495, Y.496 Chain C: V.417, C.421, A.424, F.457, V.460, N.461, F.494, I.498 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: B:I.495, B:Y.496, C:A.424, C:F.457, C:V.460 ZB4.4: 11 residues within 4Å: Chain C: S.492, I.495, Y.496 Chain D: V.417, C.421, A.424, F.457, V.460, N.461, F.494, I.498 5 PLIP interactions: 2 interactions with chain C, 3 interactions with chain D Hydrophobic interactions: C:I.495, C:Y.496, D:A.424, D:F.457, D:V.460

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmiege, P. et al., (+)ML-SI3 bound TRPML2 in a pre-open state. To Be Published

Release Date

2025-06-18

Peptides

Mucolipin-2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Mucolipin-2

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