SMTL ID : 9el0.1

ML2-SA1 bound TRPML2 in a pre-open state

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x 01: (3aS,4S,7R,7aS)-3-(2,6-dichlorophenyl)-3a,4,5,6,7,7a-hexahydro-4,7-methano-1,2-benzoxazole

01.1: 12 residues within 4Å: Chain A: F.420, C.421, A.424, G.425, Y.428, F.457, V.460, N.461, F.494, I.498 Chain D: S.492, I.495 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain D Hydrophobic interactions: A:Y.428, A:V.460, A:F.494, D:I.495 Halogen bonds: D:S.492 01.2: 12 residues within 4Å: Chain A: S.492, I.495 Chain B: F.420, C.421, A.424, G.425, Y.428, F.457, V.460, N.461, F.494, I.498 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:Y.428, B:V.460, B:F.494, A:I.495 Halogen bonds: A:S.492 01.3: 12 residues within 4Å: Chain B: S.492, I.495 Chain C: F.420, C.421, A.424, G.425, Y.428, F.457, V.460, N.461, F.494, I.498 5 PLIP interactions: 2 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: B:I.495, C:Y.428, C:V.460, C:F.494 Halogen bonds: B:S.492 01.4: 12 residues within 4Å: Chain C: S.492, I.495 Chain D: F.420, C.421, A.424, G.425, Y.428, F.457, V.460, N.461, F.494, I.498 5 PLIP interactions: 3 interactions with chain D, 2 interactions with chain C Hydrophobic interactions: D:Y.428, D:V.460, D:F.494, C:I.495 Halogen bonds: C:S.492

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schmiege, P. et al., ML2-SA1 bound TRPML2 in a pre-open state. To Be Published

Release Date

2025-06-18

Peptides

Mucolipin-2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
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Mucolipin-2

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