SMTL ID : 9esk.2 (1 other biounit)

CDK2-cyclin A in complex with FragLite 30

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

3 x W3D: (4-bromo-2-oxopyridin-1(2H)-yl)acetic acid(Non-covalent)

W3D.1: 10 residues within 4Å: Chain A: V.22, A.35, K.37, E.55, F.84, E.85, L.87, L.138, A.148, D.149 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.35, A:F.84, A:L.138 Hydrogen bonds: A:D.149 Salt bridges: A:K.37 Halogen bonds: A:L.87 W3D.2: 7 residues within 4Å: Chain A: M.5, E.6, F.8, K.10, Y.23, L.36, Y.81 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.36, A:Y.81 Water bridges: A:K.10 Salt bridges: A:K.28 W3D.3: 3 residues within 4Å: Chain B: W.47, Q.84, D.113 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:W.47 Water bridges: B:W.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hope, I. et al., Crystallographic fragment screening of CDK2-cyclin A: FragLites map sites of protein-protein interaction. To Be Published

Release Date

2025-04-09

Peptides

Cyclin-dependent kinase 2: A
Cyclin-A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Cyclin-dependent kinase 2

Cyclin-A2

Related Entries With Identical Sequence