SMTL ID : 9et6.1 (1 other biounit)

CDK2-cyclin A in complex with FragLite 7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

hetero-1-1-mer

Ligands

4 x HHQ: 4-iodanyl-3~{H}-pyridin-2-one(Non-covalent)

HHQ.1: 4 residues within 4Å: Chain A: W.47, Q.84, I.111, D.113 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.47 Hydrogen bonds: A:Q.84 pi-Stacking: A:W.47 HHQ.2: 8 residues within 4Å: Chain B: I.14, V.22, A.35, V.68, F.84, E.85, L.87, L.138 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:I.14, B:A.35, B:L.138 Hydrogen bonds: B:L.87 HHQ.3: 6 residues within 4Å: Chain B: M.5, F.8, K.10, Y.23, L.36, Y.81 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:K.10, B:L.36, B:Y.81 HHQ.4: 5 residues within 4Å: Chain A: A.133 Chain B: K.60, L.70, D.72, V.73 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:K.60 Hydrogen bonds: B:D.72, B:V.73 Halogen bonds: B:L.70

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hope, I. et al., Crystallographic fragment screening of CDK2-cyclin A: FragLites map sites of protein-protein interaction. To Be Published

Release Date

2025-04-09

Peptides

Cyclin-A2: A
Cyclin-dependent kinase 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

Cyclin-A2

Cyclin-dependent kinase 2

Related Entries With Identical Sequence