SMTL ID : 9etb.1 (1 other biounit)

CDK2-cyclin A in complex with FragLite 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.76 Å

Oligo State

hetero-1-1-mer

Ligands

4 x PYZ: 4-IODOPYRAZOLE(Non-covalent)

PYZ.1: 3 residues within 4Å: Chain A: L.44, W.47, Q.84 1 PLIP interactions: 1 interactions with chain A pi-Stacking: A:W.47 PYZ.2: 7 residues within 4Å: Chain B: I.14, A.35, F.84, E.85, F.86, L.87, L.138 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:L.87, B:L.87 PYZ.3: 6 residues within 4Å: Chain B: F.220, G.224, P.226, V.230, P.232, Y.240 No protein-ligand interaction detected (PLIP) PYZ.4: 4 residues within 4Å: Chain B: M.5, F.8, Y.23, L.36 No protein-ligand interaction detected (PLIP)

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.5: 8 residues within 4Å: Chain A: A.133, F.134 Chain B: K.60, L.70, L.71, D.72, V.73, H.75 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.60 Salt bridges: B:K.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hope, I. et al., Crystallographic fragment screening of CDK2-cyclin A: FragLites map sites of protein-protein interaction. To Be Published

Release Date

2025-04-09

Peptides

Cyclin-A2: A
Cyclin-dependent kinase 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
C

Cyclin-A2

Cyclin-dependent kinase 2

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