SMTL ID : 9ess.1 (1 other biounit)

CDK2-cyclin A in complex with FragLite 22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.44 Å

Oligo State

hetero-1-1-mer

Ligands

5 x UUG: (4-bromo-2-methoxyphenyl)methanol(Non-covalent)

UUG.1: 7 residues within 4Å: Chain A: L.285, A.286, H.287, P.288, F.290, Q.291, V.293 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.290, A:Q.291 UUG.2: 9 residues within 4Å: Chain A: I.14, G.15, V.22, A.35, K.37, E.85, F.86, L.87, L.138 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.14, A:A.35 Hydrogen bonds: A:I.14 Water bridges: A:K.37 UUG.3: 7 residues within 4Å: Chain A: M.5, F.8, Q.9, K.10, Y.23, L.36, Y.81 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:K.10, A:L.36, A:Y.81 pi-Cation interactions: A:K.10 UUG.4: 6 residues within 4Å: Chain A: I.103, P.104, L.105, I.108, V.201, P.258 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:I.108 UUG.5: 4 residues within 4Å: Chain B: L.44, W.47, L.83, Q.84 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:L.44, B:W.47, B:Q.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hope, I. et al., Crystallographic fragment screening of CDK2-cyclin A: FragLites map sites of protein-protein interaction. To Be Published

Release Date

2025-04-09

Peptides

Cyclin-dependent kinase 2: A
Cyclin-A2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cyclin-dependent kinase 2

Cyclin-A2

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