SMTL ID : 9g47.1

The structure of Candida albicans phosphoglucose isomerase in complex with a fragment binder

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

homo-dimer

Ligands

2 x PA5: 5-PHOSPHOARABINONIC ACID(Non-covalent)

PA5.1: 12 residues within 4Å: Chain A: I.166, G.167, G.168, S.169, S.219, K.220, T.221, T.224, Q.363, E.367, K.520 Chain B: H.398 21 PLIP interactions: 19 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:G.168, A:S.169, A:S.169, A:S.169, A:K.220, A:T.221, A:T.224, A:T.224, A:Q.363, B:H.398, B:H.398 Water bridges: A:G.281, A:G.281, A:R.282, A:R.282, A:Q.513, A:K.520, A:K.520, A:K.520, A:K.520 Salt bridges: A:K.520 PA5.3: 12 residues within 4Å: Chain A: H.398 Chain B: I.166, G.167, G.168, S.169, S.219, K.220, T.221, T.224, Q.363, E.367, K.520 21 PLIP interactions: 19 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.168, B:S.169, B:S.169, B:K.220, B:T.221, B:T.224, B:Q.363, A:H.398, A:H.398 Water bridges: B:I.166, B:S.169, B:G.281, B:G.281, B:R.282, B:R.282, B:Q.513, B:K.520, B:K.520, B:K.520, B:K.520 Salt bridges: B:K.520

2 x 01: quinoxalin-5-ol

01.2: 7 residues within 4Å: Chain A: I.425, E.426 Chain B: T.201, A.202, L.205, S.233, W.237 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:T.201, B:L.205, B:W.237 Hydrogen bonds: A:E.426, A:E.426 Water bridges: A:E.426 01.4: 7 residues within 4Å: Chain A: T.201, A.202, L.205, S.233, W.237 Chain B: I.425, E.426 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:T.201, A:L.205, A:W.237 Water bridges: B:E.426, B:E.426

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, K. et al., Exploration of starting points for the chemical validation of UDP-N-acetylglucosamine pyrophosphorylase in Aspergillus fumigatus. To Be Published

Release Date

2025-07-23

Peptides

Glucose-6-phosphate isomerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glucose-6-phosphate isomerase

Related Entries With Identical Sequence