SMTL ID : 9gv2.1

Crystal structure of SARS-CoV-2 main protease (MPro) in complex with the covalently bound inhibitor FP237 (compound 8p in publication)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.56 Å
Oligo State
homo-dimer
Ligands
2 x 01: (2S)-2-[2-(3-methoxyphenoxy)ethanoylamino]-4-methyl-N-[(2S)-3-oxidanylidene-1-phenyl-pentan-2-yl]pentanamide
2 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x NA: SODIUM ION(Non-functional Binders)
2 x CL: CHLORIDE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Flury, P. et al., Design, Synthesis, and Unprecedented Interactions of Covalent Dipeptide-Based Inhibitors of SARS-CoV-2 Main Protease and Its Variants Displaying Potent Antiviral Activity. J.Med.Chem. (2025)
Release Date
2025-01-29
Peptides
3C-like proteinase nsp5: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

3C-like proteinase nsp5

Toggle Identical (AB)

Related Entries With Identical Sequence

5r7y.1 | 5r7z.1 | 5r80.1 | 5r81.1 | 5r82.1 | 5r83.1 | 5r84.1 | 5r8t.1 | 5re4.1 | 5re5.1 | 5re6.1 | 5re7.1 | 5re8.1 | 5re9.1 | 5rea.1 | 5reb.1 | 5rec.1 | 5red.1 | 5ree.1 | 5ref.1 | 5reg.1 | 5reh.1 | 5rei.1 | 5rej.1 | 5rek.1 | 5rel.1 | 5rem.1 | 5ren.1 | 5reo.1 | 5rep.1  more...