SMTL ID : 9jkz.1

CYP105A1 R84A complexed with simvastatin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 24 residues within 4Å: Chain A: F.95, I.96, H.103, R.107, F.114, L.240, L.241, A.244, T.248, T.249, I.290, A.294, R.297, A.347, F.348, G.349, V.352, H.353, Q.354, C.355, L.356, G.357, A.361 Ligands: SIM.2 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:F.95, A:F.95, A:I.96, A:F.114, A:L.240, A:I.290, A:A.294, A:L.356, A:A.361 Water bridges: A:S.71, A:R.73, A:G.296, A:G.296 Salt bridges: A:H.103, A:R.107, A:R.297, A:H.353 pi-Stacking: A:F.348 Metal complexes: A:C.355

1 x SIM: Simvastatin acid(Non-covalent)

SIM.2: 15 residues within 4Å: Chain A: R.73, V.88, P.92, I.96, L.180, V.181, S.236, L.240, A.244, T.248, I.293, A.294, T.395, I.396 Ligands: HEM.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.88, A:L.240, A:A.244, A:T.248, A:A.294, A:I.396 Salt bridges: A:R.193

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 6 residues within 4Å: Chain A: K.120, R.123, N.359, R.362, L.363, E.366 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.120 Hydrogen bonds: A:N.359

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Takita, T. et al., Room-temperature X-ray data collection enabled the structural determination of statin-bound CYP105A1. Acta Crystallogr D Struct Biol (2025)

Release Date

2025-09-24

Peptides

Vitamin D3 dihydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vitamin D3 dihydroxylase

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