SMTL ID : 9mny.1

Cryo-EM structure of human MPC with pyruvate

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 2.78 Å

Oligo State

hetero-1-1-1-1-1-1-mer

Ligands

1 x PYR: PYRUVIC ACID(Non-covalent)

PYR.1: 6 residues within 4Å: Chain A: Y.62, F.66, L.80 Chain B: K.49, W.82, L.96 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:F.66, A:L.80, B:W.82 Hydrogen bonds: A:Y.62 Salt bridges: A:H.84, B:K.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, Z. et al., Structure of mitochondrial pyruvate carrier and its inhibition mechanism. Nature (2025)

Release Date

2025-03-05

Peptides

Mitochondrial pyruvate carrier 1: A
Mitochondrial pyruvate carrier 2: B
Fab_8D3_2 heavy chain: C
Fab_8D3_2 light chain: D
Nanobody: E
MBP-PrA/G: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
E

E
C

F
F

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Mitochondrial pyruvate carrier 1

Mitochondrial pyruvate carrier 2

Fab_8D3_2 heavy chain

Fab_8D3_2 light chain

Nanobody

MBP-PrA/G

Related Entries With Identical Sequence