SMTL ID : 9u9c.1

Crystal structure of NDM-1 in complex with hydrolyzed amoxicillin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.25 Å
Oligo State
homo-dimer
Ligands
5 x ZN: ZINC ION(Non-covalent)
2 x 01: (2~{R},4~{S})-2-[(1~{R})-1-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanyl-2-oxidanylidene-ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Shi, X. et al., Crystal structure reveals the hydrophilic R1 group impairs NDM-1-ligand binding via water penetration at L3. J Struct Biol X (2025)
Release Date
2025-07-09
Peptides
Metallo-beta-lactamase type 2: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B