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Papain-like protease nsp3 | P0DTD1 PRO_0000449621
Created: May 5, 2023 at 21:33
Project Summary
Template Results
A total of 1456 templates were found to match the target sequence. This list was filtered by a heuristic down to 54. The top templates are:| Template | Sequence Identity | Biounit Oligo State | Description |
|---|---|---|---|
| 6wuu.4 | 99.69 | monomer | Non-structural protein 3 Crystal structure of the SARS CoV-2 Papain-like protease in complex with peptide inhibitor VIR250 |
| 6wuu.1 | 99.69 | monomer | Non-structural protein 3 Crystal structure of the SARS CoV-2 Papain-like protease in complex with peptide inhibitor VIR250 |
| 6wuu.2 | 99.69 | monomer | Non-structural protein 3 Crystal structure of the SARS CoV-2 Papain-like protease in complex with peptide inhibitor VIR250 |
| 7cmd.2 | 100.00 | monomer | Non-structural protein 3 Crystal structure of the SARS-CoV-2 PLpro with GRL0617 |
| 6w9c.1 | 100.00 | homo-trimer | Non-structural protein 3 The crystal structure of papain-like protease of SARS CoV-2 |
Model Results
The top models are:| Id | Template | GMQE | QMEANDisCo Global | Oligo State | Ligands | |
|---|---|---|---|---|---|---|
 | 02 | 6w9c.1.A | 0.14 | 0.80 ± 0.05 | monomer | 1 x ZN |
 | 07 | 6wuu.2.A | 0.14 | 0.79 ± 0.05 | monomer | 1 x ACE-UB4-DPP-GLY-GVE, 1 x ZN |
 | 10 | 3e9s.1.A | 0.14 | 0.79 ± 0.05 | monomer | 1 x TTT, 1 x ZN |
 | 01 | 3e9s.1.A | 0.14 | 0.79 ± 0.05 | monomer | 1 x TTT, 1 x ZN |
 | 09 | 7cmd.4.A | 0.14 | 0.79 ± 0.05 | monomer | 1 x TTT, 1 x ZN |