A0A6C1E1F5 (A0A6C1E1F5_SACPS) Saccharomyces pastorianus (Lager yeast) (Saccharomyces cerevisiae xSaccharomyces eubayanus)
Pre-mRNA-splicing factor PRP46 UniProtKBInterProInteractive Modelling
It is possible new templates exist for this target since these models were created.
However, an attempt to improve models for this target was made on 2025-04-15. The outcome - failed for technical reasons.
Available Structures
17 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| Structure of the yeast post-catalytic P complex spliceosome at 2.3 Angstrom resolution |
Heteromer P21374; P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P38302; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53913; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100.0 | 2×MG; 4×K; 2×IHP; 1×GTP; 7×ZN; | |||
| S. cerevisiae spliceosomal post-catalytic P complex |
Heteromer P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 5×MG; 1×IHP; 1×GTP; 7×ZN; | |||
| Cryo-EM structure of the yeast B*-a2 complex at an average resolution of 3.2 angstrom |
Heteromer P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×IHP; 1×GTP; 6×MG; 6×ZN; | |||
| Cryo-EM structure of the yeast B*-a1 complex at an average resolution of 3.6 angstrom |
Heteromer P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×IHP; 1×GTP; 6×MG; 6×ZN; | |||
| Cryo-EM structure of the yeast B*-b1 complex at an average resolution of 3.86 angstrom |
Heteromer P21374; P25337; P28004; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×IHP; 1×GTP; 6×MG; 6×ZN; | |||
| Cryo-EM structure of the yeast B*-b2 complex at an average resolution of 3.7 angstrom |
Heteromer P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×IHP; 1×GTP; 6×MG; 7×ZN; | |||
| Structure of a spliceosome remodeled for exon ligation |
Heteromer P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 3×MG; 2×K; 1×IHP; 1×GTP; 6×ZN; | |||
| Post-catalytic P complex spliceosome with 3' splice site docked |
Heteromer P24384; P25337; P28004; P28320; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×MG; 1×IHP; 1×GTP; 7×ZN; | |||
| Structure of a spliceosome remodeled for exon ligation |
Heteromer P25337; P28004; P33334; P33411; P36048; P38241; P40018; P40204; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06217; Q12046; Q12309; Q12330; Q12417; | 100 | 3×MG; 2×K; 1×IHP; 1×GTP; 6×ZN; | |||
| yeast activated spliceosome |
Heteromer P0C074; P20095; P25337; P28004; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P43321; P46947; P49955; P53333; P54999; Q02260; Q03654; Q04048; Q04693; Q06217; Q06835; Q07930; Q12046; Q12309; Q12330; Q12417; | 100.0 | ||||
| Cryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolution |
Heteromer P21374; P25337; P28004; P28320; P32523; P33334; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×GTP; 6×MG; 7×ZN; | |||
| Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 a… |
Heteromer P25337; P28004; P28320; P32523; P33334; P36048; P36118; P38241; P40018; P40204; P40567; P40968; P43321; P52868; P53131; P53277; P54999; Q02260; Q03654; Q03772; Q04048; Q06091; Q06217; Q06411; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×IHP; 1×GTP; 6×MG; 6×ZN; | |||
| Cryo-EM structure of the activated spliceosome (Bact complex) at 3.5 angstrom resolution |
Heteromer P0C074; P20095; P25337; P28004; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40565; P40968; P43321; P46947; P49955; P53277; P53333; P53769; P54999; Q02260; Q02554; Q02770; Q03375; Q03654; Q03772; Q04048; Q04693; Q06091; Q06217; Q06835; Q07350; Q07930; Q12046; Q12309; Q12330; Q12417; Q99181; | 100 | 1×GTP; 5×MG; 13×ZN; 1×ADP; | |||
| Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom |
Heteromer P24384; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q02775; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×IHP; 1×GTP; 6×MG; 6×ZN; | |||
| Cryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolution |
Heteromer P15938; P25337; P28004; P32523; P33334; P33411; P36048; P38241; P40018; P40204; P40567; P40968; P43321; P53277; P53333; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100 | 1×GTP; 6×MG; 6×ZN; | |||
| Structure of the core of the yeast spliceosome immediately after branching |
Heteromer P21374; P25337; P28004; P28320; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q03772; Q04048; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100.0 | 2×MG; 7×ZN; 1×GTP; | |||
| Overall structure of the yeast spliceosome immediately after branching. |
Heteromer P15938; P21374; P25337; P28004; P28320; P32523; P32639; P33334; P36048; P38241; P40018; P40204; P40567; P43321; P53854; P54999; Q02260; Q03375; Q03654; Q04048; Q06091; Q06217; Q08963; Q12046; Q12309; Q12330; Q12417; | 100.0 | 2×MG; 7×ZN; 1×GTP; | |||
9 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 7b9v.1.M | monomer | 0.78 | 100.00 | |||
| 6jlq.1.B | monomer | 0.66 | 16.81 | |||
| 2ymu.1.A | monomer | 0.65 | 26.39 | |||
| 2ymu.1.A | monomer | 0.64 | 27.35 | |||
| 7ay0.2.A | monomer | 0.58 | 15.36 | |||
| 4nsx.1.A | monomer | 0.58 | 13.24 | |||
| 6zqb.12.A | monomer | 0.57 | 18.38 | |||
| 3mkq.1.C | monomer | 0.57 | 19.17 | |||
| 3j2t.1.A | monomer | 0.57 | 17.63 | |||