O00267 (SPT5H_HUMAN) Homo sapiens (Human)

Transcription elongation factor SPT5 UniProtKBInterProSTRINGInteractive Modelling

1087 aa; Sequence (Fasta) ; (Isoform 2)

Available Structures

33 Experimental Structures

DescriptionPDB IDOligo-stateRangeLigands
Structure of complete, activated transcription complex Pol II-DSIF-PAF-SPT6 uncovers allosteric elo…
6ted
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; P63272; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; 		176-781
9×ZN; 1×MG;
Assess
Pol II-DSIF-SPT6-PAF1c-TFIIS-nucleosome complex (stalled at +38)
7und
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; P02281; P23193; P62799; P63272; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; 		176-781
9×ZN; 1×MG;
Assess
The structure of INTAC-PEC complex
7ycx
 Heteromer
A0A481BYI6; A0A481DF93; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; F1RKE4; I3LCB2; P18615; P24928; P30153; P60899; P63272; P67775; Q5TA45; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9UL03; 		176-756
10×ZN; 2×MN; 1×MG;
Assess
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6
6gmh
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; P60899; P63272; Q6PD62; Q7KZ85; Q9GZS3; 		176-754
9×ZN; 1×MG;
Assess
Structure of an RNA polymerase II-DSIF transcription elongation complex
5oik
 Heteromer
A5PJW8; F2Z4H3; G3MZY8; P63272; Q1JQ91; Q2T9T3; Q32P73; Q32P78; Q32P79; Q32PE0; Q3T0Q3; Q3ZBC0; Q5E9B8; 		176-754
8×ZN; 1×MG;
Assess
Structural insights into human co-transcriptional capping - structure 6
8p4f
 Heteromer
A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A4X1VYD0; A0A8D1DPV6; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; P63272; Q8N1G2; 		176-754
1×MGT; 8×ZN; 1×MG; 1×SAM;
Assess
Structure of paused transcription complex Pol II-DSIF-NELF
6gml
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LJR4; I3LSI7; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; 		176-753
1×MG; 9×ZN;
Assess
Structure of active transcription elongation complex Pol II-DSIF-ELL2-EAF1(composite structure)
7oky
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00472; P60899; P63272; Q96JC9; 		176-753
1×MG; 9×ZN;
Assess
Structural insights into human co-transcriptional capping - structure 4
8p4d
 Heteromer
A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O60942; P60899; P63272; 		176-753
1×ZN;
Assess
Structural insights into human co-transcriptional capping - structure 3
8p4c
 Heteromer
A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O60942; P60899; P63272; 		176-753
3×ZN; 1×MG;
Assess
Structure of paused transcription complex Pol II-DSIF-NELF - tilted
8uha
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D0KES4; A0A8D0TE17; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; P18615; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; 		176-753
9×ZN; 1×MG;
Assess
Structure of paused transcription complex Pol II-DSIF-NELF - post-translocated
8uhd
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D0KES4; A0A8D0TE17; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; P18615; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; 		176-753
9×ZN; 1×MG;
Assess
human co-transcriptional RNA capping enzyme RNGTT
8w8e
 Heteromer
A0A481BYI6; A0A481DF93; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; O60942; P18615; P60899; P63272; Q8IXH7; Q8WX92; Q9H3P2; 		176-753
1×MG; 8×ZN; 1×GTP;
Assess
human co-transcriptional RNA capping enzyme RNGTT-CMTR1
8w8f
 Heteromer
A0A481BYI6; A0A481DF93; A0A493TD97; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D1DPV6; F1RKE4; I3LCB2; O60942; P60899; P63272; Q8N1G2; 		176-753
1×MG; 8×ZN; 1×GTP;
Assess
Pol II-DSIF-SPT6-PAF1c-TFIIS complex with rewrapped nucleosome
7unc
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A7M4DUC2; A0A8D1GCS3; P02281; P23193; P62799; P84233; Q6AZJ8; Q6P1J9; Q6PD62; Q7KZ85; Q8N7H5; Q8WVC0; Q92541; Q9GZS3; 		416-781
8×ZN; 1×MG;
Assess
Structural basis of Integrator-mediated transcription regulation
7pks
 Heteromer
A0A0B8RVL1; A0A287ADR4; A0A481DF93; A0A4X1TRS6; A0A4X1VEK9; A0A7K6NXI9; A0A7M4DUC2; F1RKE4; I3LCB2; I3LJR4; I3LSI7; P30153; P60899; P67775; Q5TA45; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9UL03; 		416-753
1×MG; 10×ZN; 2×MN;
Assess
Structure of Integrator-PP2A bound to a paused RNA polymerase II-DSIF-NELF-nucleosome complex
8rbx
 Heteromer
A0A287ADR4; A0A4X1VKG7; A0A4X1VYD0; A0A7M4DUC2; A0A8D0JYF1; A0A8D1KNW4; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P02262; P06899; P30153; P60899; P62805; P67775; Q5TA45; Q6NXT2; Q6P9B9; Q75QN2; Q8IXH7; Q8N201; Q8WX92; Q96HW7; Q96N11; Q96SY0; Q9H0H0; Q9H3P2; Q9NV88; Q9NVH2; Q9NVM9; Q9NVR2; Q9UL03; 		416-753
10×ZN; 1×MG; 2×MN;
Assess
Structure of transcription complex Pol II-DSIF-NELF-TFIIS
8uis
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D0KES4; A0A8D0TE17; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; P23193; P60899; Q8IXH7; Q9H3P2; 		416-753
8×ZN; 1×MG;
Assess
Structure of poised transcription complex Pol II-DSIF-NELF - pre-translocated
8ui0
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D0KES4; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; 		416-753
8×ZN; 1×MG;
Assess
Structure of paused transcription complex Pol II-DSIF-NELF - poised post-translocated
8uhg
 Heteromer
A0A481DF93; A0A4X1TRS6; A0A4X1TVZ5; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VTX4; A0A8D0KES4; A0A8D1AQR7; A0A8D1DPV6; A0A8W4F9W9; F1RKE4; P18615; P60899; Q8IXH7; Q8WX92; Q9H3P2; 		416-753
8×ZN; 1×MG;
Assess
Crystal structure of the human transcription elongation factor DSIF, hSpt4/hSpt5 (176-273)
3h7h
 Heteromer
P63272; 		176-269
1×BME; 1×ZN;
Assess
Structural insights into human co-transcriptional capping - structure 5
8p4e
 Heteromer
A0A4X1TRS6; A0A4X1VEK9; A0A4X1VKG7; A0A4X1VM56; A0A8W4F9W9; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O60942; P11414; P60899; Q8N1G2; 		703-754
1×MG; 8×ZN;
Assess
Structure of active transcription elongation complex Pol II-DSIF (SPT5-KOW5)
7ol0
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; P60899; 		703-753
1×MG; 8×ZN;
Assess
Structure of active transcription elongation complex Pol II-DSIF (SPT5-KOW5)-ELL2-EAF1 (composite s…
7okx
 Heteromer
A0A287ADR4; A0A4X1TRS6; A0A4X1VEK9; A0A4X1VYD0; A0A7M4DUC2; F1RKE4; I3LCB2; I3LCH3; I3LGP4; I3LSI7; O00472; P60899; Q96JC9; 		703-753
1×MG; 8×ZN;
Assess
The crystal structure of a self-peptide complexed to Abacavir and HLA-B*57:01
5u98
 Heteromer
P01889; P61769; 		980-988
1×1KX;
Assess
Crystal Structure of Human Rtf1 Plus3 Domain in Complex with Spt5 CTR Phosphopeptide
4l1u
 Heteromer
Q92541; 		781-788
7×SO4;
Assess
4th KOW domain of human hSpt5
6eqy
monomer533-647
Assess
6th KOW domain of human hSpt5
6er0
monomer974-1087
Assess
Crystal structure of the KOWx-KOW4 domain of human DSIF
5oho
monomer536-646
2×GOL;
Assess
Crystal structure of the KOW6-KOW7 domain of human DSIF
5ohq
monomer979-1086
1×CL; 1×NA;
Assess
Solution structure of the fifth KOW motif of human transcription elongation factor SPT5
2e70
monomer694-757
Assess
Solution structure of the third KOW motif of transcription elongation factor SPT5
2do3
monomer462-523
Assess
Solution structure of the second KOW motif of human transcription elongation factor SPT5
2e6z
monomer420-471
Assess

3 SWISS-MODEL models

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
5oik.1.Qmonomer0.68176-754
100.00
Assess
8p4d.1.Rmonomer0.65176-753
100.00
Assess
8p4c.1.Rmonomer0.62176-753
100.00
Assess

3 SWISS-MODEL models built on isoform sequence

TemplateIsoformOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
Isoform 25oik.1.Qmonomer0.68172-750
99.54
Assess
Isoform 28p4d.1.Rmonomer0.64172-749
99.54
Assess
Isoform 28p4c.1.Rmonomer0.62172-749
99.54
Assess