P19388 | SWISS-MODEL Repository

P19388 (RPAB1_HUMAN) Homo sapiens (Human)

DNA-directed RNA polymerases I, II, and III subunit RPABC1 UniProtKB Protein Atlas InterPro STRING Interactive Modelling

210 aa; Sequence (Fasta) ; 1 identical sequence: Homo sapiens: E5KT65

Available Structures

33 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Cryo-EM structure of human RNA Polymerase I in complex with RRN3	7oba PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q3B726; Q9GZS1; Q9H9Y6; Q9NYV6; Q9P1U0;	1-210	99.52	7×ZN;
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Human holo-PIC in the initial transcribing state	5iy8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19387; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-210	100	2×MG; 11×ZN;
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cryo-EM structure of human RNA polymerase III in apo state	7d59 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	1-210	100	7×ZN; 1×SF4;
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Cryo-EM structure of human RNA Polymerase I Open Complex	7obb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q3B726; Q9GZS1; Q9H9Y6; Q9P1U0;	1-210	99.52	7×ZN;
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Human holo-PIC in the initial transcribing state (no IIS)	5iy9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19387; P19447; P20226; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-210	100	2×MG; 10×ZN;
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Human core-PIC in the open state	5iyb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19387; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-210	100	2×MG; 11×ZN;
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Human holo-PIC in the closed state	5iy6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19387; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-210	100	2×MG; 11×ZN;
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Human holo-PIC in the open state	5iy7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19387; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-210	100	2×MG; 11×ZN;
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Human core-PIC in the initial transcribing state	5iyc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19387; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-210	100	2×MG; 11×ZN;
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Structure of the human Mediator-bound transcription pre-initiation complex	7lbm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0JLT2; O15514; O43513; O60244; O75448; O75586; P13984; P18074; P19387; P19447; P20226; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13503; Q13888; Q13889; Q15528; Q6P2C8; Q6ZYL4; Q71SY5; Q92759; Q96G25; Q96HR3; Q96RN5; Q9BTT4; Q9BUE0; Q9H204; Q9H944; Q9NPJ6; Q9NVC6; Q9NWA0; Q9NX70; Q9P086; Q9ULK4; Q9Y2X0; Q9Y3C7;	1-210	100	2×MG; 16×ZN; 1×SF4;
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Human core-PIC in the initial transcribing state (no IIS)	5iyd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19387; P20226; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-210	100	2×MG; 11×ZN;
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Human holo-PIC in the closed state	6o9l PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P18074; P19387; P19447; P20226; P23193; P24928; P29083; P29084; P30876; P32780; P35269; P36954; P50613; P51946; P51948; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403; Q13888; Q13889; Q6ZYL4; Q92759;	1-210	100	2×MG; 17×ZN; 1×SF4;
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Human core-PIC in the closed state	5iya PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P13984; P19387; P20226; P23193; P24928; P29083; P29084; P30876; P35269; P36954; P52434; P52435; P52655; P52657; P53803; P61218; P62487; P62875; Q00403;	1-210	100	2×MG; 11×ZN;
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cryo-EM structure of human RNA polymerase III in elongating state	7d58 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	1-210	100	7×ZN; 1×SF4;
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Cryo-EM structure of human RNA Polymerase III elongation complex 2	7aea PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	7×ZN; 1×SF4; 1×MG;
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human Pol III pre-termination complex	7fjj PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	1×MG; 7×ZN; 1×SF4;
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human Pol III elongation complex	7fji PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	7×ZN; 1×SF4;
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Cryo-EM structure of human RNA Polymerase III elongation complex 3	7ae3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	7×ZN; 1×SF4; 1×MG;
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Cryo-EM structure of human RNA Polymerase I in elongation state	7ob9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q3B726; Q9GZS1; Q9H9Y6; Q9P1U0;	2-210	99.52	6×ZN; 1×MG;
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human RNA polymerase III pre-initiation complex closed DNA 1	8ity PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6H8Y1; O14802; O15160; O15318; O75575; P05423; P0DPB6; P20226; P52434; P53803; P61218; P62875; Q16533; Q5SXM2; Q92966; Q9BUI4; Q9H1D9; Q9HAW0; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	7×ZN; 1×MG; 1×SF4;
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RNA polymerase III pre-initiation complex open complex 1	8iuh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6H8Y1; O14802; O15160; O15318; O75575; P05423; P0DPB6; P20226; P52434; P53803; P61218; P62875; Q16533; Q5SXM2; Q92966; Q9BUI4; Q9H1D9; Q9HAW0; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	8×ZN; 1×MG; 1×SF4;
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RNA polymerase III pre-initiation complex melting complex 1	8iue PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A6H8Y1; O14802; O15160; O15318; O75575; P05423; P0DPB6; P20226; P52434; P53803; P61218; P62875; Q16533; Q5SXM2; Q92966; Q9BUI4; Q9H1D9; Q9HAW0; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	8×ZN; 1×MG; 1×SF4;
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Cryo-EM structure of human apo RNA Polymerase III	7a6h PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	7×ZN; 1×MG; 1×SF4;
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Cryo-EM structure of human RNA Polymerase III elongation complex 1	7ae1 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100	7×ZN; 1×SF4; 1×MG;
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Human RNA polymerase I	8a43 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q9GZS1; Q9H9Y6; Q9P1U0;	2-210	100
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Apo Human RNA Polymerase III	7ast PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	2-210	100
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Structure of the pre state human RNA Polymerase I Elongation Complex	7vba PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q3B726; Q9GZS1; Q9H9Y6; Q9P1U0;	4-210	100.0	5×ZN; 1×MG; 1×2TM;
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Structure of the post state human RNA Polymerase I Elongation Complex	7vbb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q3B726; Q9GZS1; Q9H9Y6; Q9P1U0;	4-210	100.0	5×ZN; 1×MG;
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Back track state of human RNA Polymerase I Elongation Complex	7vbc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15160; O15446; O95602; P0DPB6; P52434; P53803; P61218; P62875; Q3B726; Q9GZS1; Q9H9Y6; Q9P1U0;	4-210	100.0	5×ZN; 1×MG;
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Structure of the p53/RNA polymerase II assembly	6xre PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P04637; P19387; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	4-210	100	1×MG; 8×ZN;
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RNA polymerase III EC complex in post-translocation state	7du2 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	6-210	100.0	1×MG; 6×ZN; 1×SF4;
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Structure of Human RNA Polymerase III elongation complex	7dn3 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O14802; O15160; O15318; O75575; P05423; P0DPB6; P52434; P53803; P61218; P62875; Q9BUI4; Q9H1D9; Q9NVU0; Q9NW08; Q9Y2Y1; Q9Y535;	6-210	100.0	1×MG; 6×ZN; 1×SF4;
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RNA Pol II(G)	6drd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O15514; P0CAP2; P19387; P24928; P30876; P36954; P52434; P52435; P53803; P61218; P62487; P62875;	6-210	98.38	5×ZN;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	5iy8.1.E	monomer	0.80	1-210		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P19388 (RPAB1_HUMAN) Homo sapiens (Human)

DNA-directed RNA polymerases I, II, and III subunit RPABC1 UniProtKBProtein AtlasInterProSTRINGInteractive Modelling

Available Structures

33 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

DNA-directed RNA polymerases I, II, and III subunit RPABC1 UniProtKB Protein Atlas InterPro STRING Interactive Modelling