P61960 | SWISS-MODEL Repository

P61960 (UFM1_HUMAN) Homo sapiens (Human)

Ubiquitin-fold modifier 1 UniProtKB InterPro STRING Interactive Modelling

85 aa; Sequence (Fasta) ; (Isoform 2); 73 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

14 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
UFC1-UFM1 conjugate	8bzr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9Y3C8;	2-83	100	8×EDO;
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Crystal structure of Ufm1 in complex with UBA5	5hkh PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9GZZ9;	2-83	100
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Crystal structure of human UBA5 in complex with UFM1	5iaa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9GZZ9;	4-83	100	2×ZN;
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Crystal structure of human UBA5 in complex with UFM1 and AMP	5l95 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9GZZ9;	4-83	100	1×AMP; 2×ZN;
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E1 enzyme for ubiquitin like protein activation in complex with UBL	6h77 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer Q9GZZ9;	1-78	100	2×ATP; 4×MG; 2×ZN; 18×EDO;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	8oj5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	1-78	100	220×MG; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	8ohd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	1-78	100	220×MG; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	8oj0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61619; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	1-78	100	220×MG; 5×ZN;
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UFL1 E3 ligase bound 60S ribosome	8qfc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P62906; Q96HY6; Q96JB5;	2-77	100
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Solution Structure of Mouse Hypothetical 9.1 kDa Protein, A Ubiquitin-like Fold	1j0g PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1-85	100
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Solution Structure of Ufm1, a ubiquitin-fold modifier	1wxs PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1-83	100
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Crystal structure of Ufm1 fused to UFBP1 UFIM	7w3n PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	1-79	100
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Structure of a Ubiquitin like protein with an E1 fragment	5ia8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	2-78	100
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Crystal structure of Ubiquitin fold modifier 1 (Ufm1)	5ia7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	monomer	4-77	100
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	5xda.1.E	monomer	0.84	1-84		88.10
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

1 SWISS-MODEL model built on isoform sequence

	Isoform	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	Isoform 2	5xda.1.E	monomer	0.75	35-102		85.29
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P61960 (UFM1_HUMAN) Homo sapiens (Human)

Ubiquitin-fold modifier 1 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

14 Experimental Structures

1 SWISS-MODEL model

1 SWISS-MODEL model built on isoform sequence

Alignments

Background

Resolution

Ubiquitin-fold modifier 1 UniProtKB InterPro STRING Interactive Modelling