P83882 | SWISS-MODEL Repository

P83882 (RL36A_MOUSE) Mus musculus (Mouse)

Large ribosomal subunit protein eL42 UniProtKB InterPro STRING Interactive Modelling

106 aa; Sequence (Fasta) ; 107 identical sequences

It is possible new templates exist for this target since these models were created.

Available Structures

31 Experimental Structures

Description	PDB ID	Oligo-state	Range	Seq id (%)	Ligands
Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus …	4d5y PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer G1TT27;	1-106
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Cryo-EM structure of a pre-60S ribosomal subunit - state B	6lsr PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q969S3; Q96D46; Q9H089; Q9UQ80; Q9Y3U8;	2-106	100	246×MG;
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Cryo-EM structure of the human Ebp1 - 80S ribosome	7bhp PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9UQ80; Q9Y3U8;	2-106	100	41×MG; 4×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (in-vitro reconstitution)	8oj5 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	2-106	100	220×MG; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 1 (native)	8oj8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P38377; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9Y3U8;	2-106	100	220×MG; 5×ZN;
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Tetracenomycin X bound to the human ribosome	6y6x PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62945; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96L21; Q9Y3U8;	2-106	100	229×MG; 1×OCW; 5×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 3 (native)	8ohd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	2-106	100	220×MG; 5×ZN;
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Mus musculus brain neocortex ribosome 60S bound to Ebp1	6swa PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O09167; O55142; P12970; P14115; P14148; P19253; P27659; P35980; P41105; P47911; P47915; P47962; P47963; P47964; P50580; P51410; P62717; P62751; P62830; P62889; P62900; P62911; P62918; P62947; P67984; P84099; Q4FZH2; Q4VAF2; Q505A8; Q5BLJ9; Q5M9K3; Q5M9P1; Q6ZWV3; Q6ZWV7; Q8BP67; Q9CPR4; Q9CR57; Q9CXW4; Q9CZM2; Q9D1R9; Q9D823; Q9D8E6; Q9JJI8;	2-106	100	247×MG; 3×ZN;
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60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)	8oj0 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P60059; P60468; P61254; P61313; P61353; P61513; P61619; P61927; P61960; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q96HY6; Q96JB5; Q96L21; Q9Y3U8;	2-106	100	220×MG; 5×ZN;
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Human nuclear pre-60S ribosomal subunit (State L2)	8fle PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	2-105	100	87×MG; 6×ZN;
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Human nuclear pre-60S ribosomal subunit (State K1)	8fla PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-105	100	88×MG; 6×ZN; 1×GDP; 1×K;
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Human nuclear pre-60S ribosomal subunit (State J1)	8fl6 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	2-105	100	88×MG; 6×ZN; 1×GDP; 1×K;
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Human nuclear pre-60S ribosomal subunit (State L3)	8flf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9Y3U8;	2-105	100	87×MG; 6×ZN;
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Human nuclear pre-60S ribosomal subunit (State K2)	8flb PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-105	100	88×MG; 6×ZN; 1×GDP; 1×K;
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Human nuclear pre-60S ribosomal subunit (State J2)	8fl7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	2-105	100	88×MG; 6×ZN; 1×GDP; 1×K;
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Human nuclear pre-60S ribosomal subunit (State K3)	8flc PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-105	100	88×MG; 6×ZN; 1×GDP; 1×K;
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Human nuclear pre-60S ribosomal subunit (State L1)	8fld PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q6DKI1; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9Y3U8;	2-105	100	87×MG; 6×ZN;
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Human nuclear pre-60S ribosomal subunit (State J3)	8fl9 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9Y3U8;	2-105	100	88×MG; 6×ZN; 1×GDP; 1×K;
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Structure of the mammalian 60S ribosomal subunit	3j7o PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer A0A4X1UAP0; A0A4X1VLH7; A0A8D0MVZ5; A1XQU3; A1XQU5; F1RGC0; F2Z522; F2Z546; F2Z554; F2Z567; I3L7Y1; I3LP78; I3LSD3; K7GP63; P49666; P62831; P62901; P63053; P67985; P83884; Q29205; Q29223; Q29361; Q6QAT0; Q95281; Q95342;	2-105	100	130×MG; 3×ZN;
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Cryo-EM structure of a human pre-60S ribosomal subunit - state A	6lu8 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96D46; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9Y3U8;	2-104	100	247×MG;
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human delta-METTL18 60S ribosome	7f5s PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62945; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	2-104	100	279×MG; 5×ZN;
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eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16	9gmo PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q969S3; Q9Y3U8;	2-104	100	227×MG; 155×K; 2×NA; 1×GTP; 1×EPE; 5×ZN;
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Human mature large subunit of the ribosome with eIF6 and homoharringtonine bound	8a3d PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	2-104	100	229×MG; 155×K; 2×NA; 1×HMT; 1×SPM; 1×EPE; 5×ZN;
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Cryo-EM structure of a pre-60S ribosomal subunit - state C	6lqm PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q969S3; Q96D46; Q96L21; Q9Y3U8;	2-103	100	251×MG;
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UFL1 E3 ligase bound 60S ribosome	8qfd PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O94874; P18077; P18124; P18621; P26373; P27635; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P62987; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q9Y3U8;	2-103	100	161×MG; 5×ZN;
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human nuclear pre-60S ribosomal particle - State G	8ine PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-102	100	1×GDP; 1×MG; 1×K;
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Cryo-EM structure of a pre-60S ribosomal subunit - state preA	6lss PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9Y3U8;	2-102	100	250×MG;
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human nuclear pre-60S ribosomal particle - State G	8idt PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-102	100	1×GDP; 2×MG; 1×K; 1×GTP;
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human nuclear pre-60S ribosomal particle - State F	8idy PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer O00488; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q96EY4; Q9BRT6; Q9BZE4; Q9NVU7; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-101	100	1×GDP; 1×MG; 1×K;
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EIF6-bound large subunit of the human ribosome	7ow7 PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer P18077; P18124; P18621; P26373; P32969; P36578; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62899; P62910; P62913; P62917; P63173; P83731; P83881; P84098; Q02543; Q02878; Q07020; Q6IPH7; Q96L21; Q9Y3U8;	2-98	100	223×MG; 5×ZN; 153×K; 4×NA; 1×BR;
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human nuclear pre-60S ribosomal particle - State F	8inf PDBe PDBe-KB PDBj PDBsum RCSB SMTL	Heteromer E9PRG8; O00488; O00541; O76021; O95478; P18077; P18124; P18621; P26373; P30050; P32969; P35268; P36578; P39023; P40429; P42766; P46776; P46777; P46778; P46779; P47914; P49207; P50914; P56537; P61254; P61313; P61353; P61513; P61927; P62424; P62750; P62829; P62888; P62891; P62899; P62906; P62910; P62913; P62917; P63173; P83881; P84098; Q02543; Q02878; Q07020; Q13823; Q6DKI1; Q96EY4; Q9BRT6; Q9BYG3; Q9BZE4; Q9NVU7; Q9NZM5; Q9UHA3; Q9UKD2; Q9UNZ5; Q9Y3U8;	2-97	100	1×GDP; 1×MG; 1×K;
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1 SWISS-MODEL model

	Template	Oligo-state	QMEANDisCo	Range	Ligands	Trg-Tpl Seq id (%)
	8glp.74.A	monomer	0.77	2-106		100.00
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	Model ID	Oligo-state	Avg pLDDT	Range	Trg-Mdl Seq Id (%)

	Model ID	Oligo-state	Avg Confidence	Range	Trg-Mdl Seq id (%)

P83882 (RL36A_MOUSE) Mus musculus (Mouse)

Large ribosomal subunit protein eL42 UniProtKBInterProSTRINGInteractive Modelling

Available Structures

31 Experimental Structures

1 SWISS-MODEL model

Alignments

Background

Resolution

Large ribosomal subunit protein eL42 UniProtKB InterPro STRING Interactive Modelling