Q01080 (RPA49_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
DNA-directed RNA polymerase I subunit RPA49 UniProtKBInterProSTRINGInteractive Modelling
415 aa; Sequence (Fasta) ;
8 identical sequences: Saccharomyces cerevisiae: N1P524, G2WLL8, C8ZFY9, C7GPB3, B5VQG1, B3LP88; Saccharomyces pastorianus: A0A6C1DZ12; Saccharomyces boulardii: A0A0L8VI96
Available Structures
41 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| RNA polymerase I Initial Transcribing Complex State 3 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 6×ZN; | |||
| RNA Polymerase I-tWH-Rrn3-DNA |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P36070; P40422; P46669; P47006; P50106; | 100.0 | 6×ZN; | |||
| RNA Polymerase I elongation complex with A49 tandem winged helix domain |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 6×ZN; | |||
| Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) with fully-… |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 6×ZN; | |||
| RNA Polymerase I Open Complex conformation 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100.0 | 8×ZN; | |||
| Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 1×MG; 6×ZN; 1×G2P; | |||
| RNA polymerase I structure with an alternative dimer hinge |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 7×ZN; | |||
| Structure of RNA polymerase I at 2.8 A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 7×ZN; 1×SO4; | |||
| RNA Polymerase I Pre-initiation complex DNA opening intermediate 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 1×ZN; | |||
| Yeast RNA polymerase I elongation complex at 3.8A |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 6×ZN; 1×MG; 1×SO4; | |||
| RNA Polymerase I Pre-initiation complex DNA opening intermediate 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 1×ZN; | |||
| Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 8×ZN; 5×SO4; 1×MG; | |||
| Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 8×ZN; | |||
| Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 8×ZN; | |||
| RNA polymerase I initially transcribing complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 7×ZN; 1×MG; 1×SO4; | |||
| Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 6×ZN; 1×MG; | |||
| Yeast RNA polymerase I elongation complex stalled by an apurinic site, closed state |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 1×MG; 6×ZN; | |||
| Yeast RNA polymerase I elongation complex stalled by an apurinic site with the C-terminal of A12 in… |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 1×MG; 7×ZN; | |||
| Structure of 14-subunit RNA polymerase I at 3.0 A resolution, crystal form C2-100 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 3×SO4; 7×ZN; 1×MG; 1×MPD; | |||
| Structure of 14-subunit RNA polymerase I at 3.27 A resolution, crystal form C2-93 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 7×ZN; | |||
| Structure of 14-subunit RNA polymerase I at 3.35 A resolution, crystal form C2-90 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 7×ZN; | |||
| RNA Polymerase I Closed Conformation 1 (CC1) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | ||||
| RNA Polymerase I Closed Conformation 2 (CC2) |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | ||||
| RNA Polymerase I Open Complex conformation 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 8×ZN; | |||
| RNA Polymerase I open complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 7×ZN; | |||
| Monomeric RNA polymerase I at 4.9 A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 6×ZN; | |||
| RNA polymerase I pre-initiation complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100.0 | 7×ZN; | |||
| RNA polymerase I Initial Transcribing Complex |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 6×ZN; | |||
| RNA Polymerase I Initial Transcribing Complex State 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 6×ZN; | |||
| RNA polymerase I Initial Transcribing Complex State 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 7×ZN; | |||
| early intermediate RNA Polymerase I Pre-initiation complex - eiPIC |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P32786; P36070; P40422; P40992; P46669; P47006; P50106; Q04712; | 100 | 7×ZN; 1×MG; | |||
| Yeast RNA polymerase I elongation complex stalled by an apurinic site |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 1×MG; 6×ZN; | |||
| RNA polymerase I-Rrn3 complex at 4.8 A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P36070; P40422; P46669; P47006; P50106; | 100 | 7×ZN; | |||
| RNA Polymerase I elongation complex 1 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 6×ZN; | |||
| RNA Polymerase I elongation complex 2 |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100.0 | 6×ZN; | |||
| Yeast RNA polymerase I elongation complex stalled by an apurinic site bound to nucleotide analog AM… |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 6×ZN; 1×APC; 1×MG; | |||
| Yeast RNA polymerase I elongation complex stalled by an apurinic site bound to nucleotide analog AM… |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 6×ZN; 1×MG; 1×APC; | |||
| Yeast RNA polymerase I elongation complex stalled by an apurinic site, open state |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; | 100.0 | 4×ZN; | |||
| Free monomeric RNA polymerase I at 4.0A resolution |
Heteromer P07703; P10964; P20434; P20435; P20436; P22138; P22139; P28000; P32529; P40422; P46669; P47006; P50106; | 100 | 7×ZN; 1×SO4; | |||
| Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49 | monomer | 99.54 | ||||
| Crystal structure of tandem winged helix domain of RNA polymerase I subunit A49 (P4) | monomer | 100.0 | ||||
1 SWISS-MODEL model
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5w66.1.M | monomer | 0.69 | 100.00 | |||