SMTL ID : 1fq7.1 (1 other biounit)

X-RAY STRUCTURE OF INHIBITOR CP-72,647 BOUND TO SACCHAROPEPSIN

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA- BMA- KBG: beta-D-arabino-hexopyranos-2-ulose-(1-2)-beta-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-BMA-KBG.1: 12 residues within 4Å: Chain A: K.66, A.67, N.68, T.70, D.101, D.127, D.132, K.133, V.134, V.135, Y.139, Q.143 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.127, A:D.127, A:D.132

1 x 2Y3: N-(tert-butoxycarbonyl)-L-phenylalanyl-N-[(2S,3S,5R)-1-cyclohexyl-3-hydroxy-7-methyl-5-(methylcarbamoyl)octan-2-yl]-L-histidinamide(Non-covalent)

2Y3.2: 19 residues within 4Å: Chain A: Q.14, I.31, D.33, G.35, S.36, Y.76, G.77, T.78, T.112, F.113, F.118, I.121, Y.193, D.218, G.220, T.221, S.222, Q.247, I.303 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:Q.14, A:I.31, A:Y.76, A:T.112, A:F.113, A:F.118, A:Y.193, A:T.221, A:I.303 Hydrogen bonds: A:D.33, A:G.35, A:G.77, A:T.78, A:T.78, A:T.78, A:G.220, A:S.222, A:S.222 Water bridges: A:L.223

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain A: Y.207, I.262, N.269 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.269

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cronin, N.B. et al., X-ray structures of five renin inhibitors bound to saccharopepsin: exploration of active-site specificity. J.Mol.Biol. (2000)

Release Date

2000-09-20

Peptides

SACCHAROPEPSIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SACCHAROPEPSIN

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