SMTL ID : 1fzh.1

METHANE MONOOXYGENASE HYDROXYLASE, FORM II PRESSURIZED WITH XENON GAS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-oligomer

Ligands

4 x FE: FE (III) ION(Non-covalent)

FE.1: 5 residues within 4Å: Chain A: E.114, E.144, H.147, E.243 Ligands: FE.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.114, A:E.144, A:H.147, H2O.132, H2O.133 FE.2: 6 residues within 4Å: Chain A: Q.140, E.144, E.209, E.243, H.246 Ligands: FE.1 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.144, A:E.209, A:E.243, A:E.243, A:H.246 FE.3: 4 residues within 4Å: Chain B: E.114, E.144, H.147 Ligands: FE.4 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.114, B:E.144, B:H.147, H2O.266, H2O.267 FE.4: 5 residues within 4Å: Chain B: E.144, E.209, E.243, H.246 Ligands: FE.3 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.144, B:E.209, B:E.243, B:H.246, H2O.267

4 x CA: CALCIUM ION(Non-covalent)

CA.5: 1 residues within 4Å: Chain A: N.527 No protein-ligand interaction detected (PLIP) CA.6: 1 residues within 4Å: Chain C: D.348 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:D.348 CA.7: 1 residues within 4Å: Chain C: E.222 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:E.222 CA.8: 3 residues within 4Å: Chain B: D.334, Q.337, D.338 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.334, B:D.338, H2O.264

11 x XE: XENON(Non-functional Binders)(Non-covalent)

XE.9: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) XE.10: 1 residues within 4Å: Chain A: M.288 No protein-ligand interaction detected (PLIP) XE.11: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) XE.12: 3 residues within 4Å: Chain A: V.106, L.289, F.290 No protein-ligand interaction detected (PLIP) XE.13: 3 residues within 4Å: Chain B: V.106, L.289, F.290 No protein-ligand interaction detected (PLIP) XE.14: 4 residues within 4Å: Chain A: Y.115, T.148, H.149 Chain C: V.177 No protein-ligand interaction detected (PLIP) XE.15: 4 residues within 4Å: Chain B: Y.115, T.148, H.149 Chain D: V.177 No protein-ligand interaction detected (PLIP) XE.16: 4 residues within 4Å: Chain A: L.405, C.517, V.518, F.519 No protein-ligand interaction detected (PLIP) XE.17: 4 residues within 4Å: Chain A: L.353, T.356, L.405, L.478 No protein-ligand interaction detected (PLIP) XE.18: 4 residues within 4Å: Chain B: L.405, C.517, V.518, F.519 No protein-ligand interaction detected (PLIP) XE.19: 4 residues within 4Å: Chain B: L.353, T.356, L.405, L.478 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Whittington, D.A. et al., Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase. Biochemistry (2001)

Release Date

2001-04-27

Peptides

METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN: AB
METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN: CD
METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN: EF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN

METHANE MONOOXYGENASE COMPONENT A, BETA CHAIN

METHANE MONOOXYGENASE COMPONENT A, GAMMA CHAIN

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