SMTL ID : 1k8r.1

Crystal structure of Ras-Bry2RBD complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: K.16, S.17, T.35, D.57, T.58 Ligands: GNP.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:S.17, A:T.35, A:T.58

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.2: 25 residues within 4Å: Chain A: G.12, G.13, V.14, G.15, K.16, S.17, A.18, F.28, V.29, D.30, E.31, Y.32, P.34, T.35, A.59, G.60, Q.61, N.116, K.117, D.119, L.120, S.145, A.146, K.147 Ligands: MG.1 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:G.13, A:V.14, A:G.15, A:K.16, A:K.16, A:S.17, A:A.18, A:V.29, A:T.35, A:T.35, A:T.35, A:G.60, A:N.116, A:K.117, A:K.117, A:A.146, A:K.147 Salt bridges: A:D.119 pi-Stacking: A:F.28, A:F.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scheffzek, K. et al., The Ras-Byr2RBD complex: structural basis for Ras effector recognition in yeast. Structure (2001)

Release Date

2002-03-13

Peptides

Transforming protein P21/H-RAS-1: A
Protein kinase byr2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transforming protein P21/H-RAS-1

Protein kinase byr2

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