SMTL ID : 1n0u.1

Crystal structure of yeast elongation factor 2 in complex with sordarin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

1 x SO1: [1R-(1.ALPHA.,3A.BETA.,4.BETA.,4A.BETA.,7.BETA.,7A.ALPHA.,8A.BETA.)]8A-[(6-DEOXY-4-O-METHYL-BETA-D-ALTROPYRANOSYLOXY)METHYL]-4-FORMYL-4,4A,5,6,7,7A,8,8A-OCTAHYDRO-7-METHYL-3-(1-METHYLETHYL)-1,4-METHANO-S-INDACENE-3A(1H)-CARBOXYLIC ACID(Non-covalent)

SO1.1: 17 residues within 4Å: Chain A: Q.490, L.519, Y.521, S.523, E.524, I.529, P.559, V.560, V.561, A.562, P.727, F.729, V.774, M.796, V.797, F.798, W.801 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:Y.521, A:I.529, A:P.559, A:P.727, A:F.729, A:F.729, A:V.774, A:V.774, A:F.798, A:F.798, A:F.798, A:F.798, A:W.801 Hydrogen bonds: A:Q.490, A:E.524, A:A.562, A:F.798 Water bridges: A:S.525

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jorgensen, R. et al., Two crystal structures demonstrate large conformational changes in the eukaryotic ribosomal translocase. Nat. Struct. Biol. (2003)

Release Date

2003-02-11

Peptides

Elongation factor 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Elongation factor 2

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