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SMTL ID : 4v4b.1

Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map.

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-oligomer
Ligands
None
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Spahn, C.M. et al., Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation. Embo J. (2004)
Release Date
2014-07-09
Peptides
Elongation factor 2: B
40S ribosomal protein S0-A: C
40S ribosomal protein S3: D
40S ribosomal protein S9-A: E
40S ribosomal protein S2: F
40S ribosomal protein S5: G
40S ribosomal protein S22: H
40S ribosomal protein S16: I
40S ribosomal protein S20: J
40S ribosomal protein S14-A: K
40S ribosomal protein S23: L
40S ribosomal protein S18: M
40S ribosomal protein S29-B: N
40S ribosomal protein S13: O
40S ribosomal protein S11: P
40S ribosomal protein S15: Q
60S ribosomal protein L1: T
60S ribosomal protein L2: U
60S ribosomal protein L3: V
60S ribosomal protein L4-B: W
60S ribosomal protein L5: X
60S ribosomal protein L7-A: Y
60S ribosomal protein L8-A: Z
60S ribosomal protein L9-A: 0
60S ribosomal protein L10: 1
60S ribosomal protein L11: 2
60S ribosomal protein L12: 3
60S ribosomal protein L15-A: 4
60S ribosomal protein L16-A: 5
60S ribosomal protein L17-A: 6
60S ribosomal protein L18: 7
60S ribosomal protein L19: 8
60S ribosomal protein L21-A: 9
60S ribosomal protein L23: a
60S ribosomal protein L24-A: b
60S ribosomal protein L25: c
60S ribosomal protein L26-A: d
60S ribosomal protein L28: e
60S ribosomal protein L32: f
60S ribosomal protein L31: g
60S ribosomal protein L35: h
60S ribosomal protein L37-A: i
60S ribosomal protein L42: j
60S ribosomal protein L43: k
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
AT
C
AB
D
AC
E
AD
F
AE
G
AG
H
AH
I
AI
J
AJ
K
AK
L
AL
M
AM
N
AN
O
AO
P
AQ
Q
AS
T
BA
U
BB
V
BC
W
BD
X
BE
Y
BF
Z
BG
0
BH
1
BI
2
BJ
3
BK
4
BL
5
BM
6
BN
7
BO
8
BP
9
BQ
a
BR
b
BS
c
BT
d
BU
e
BV
f
B0
g
BW
h
BX
i
BY
j
BZ
k
B9

Elongation factor 2

40S ribosomal protein S0-A

40S ribosomal protein S3

40S ribosomal protein S9-A

40S ribosomal protein S2

40S ribosomal protein S5

40S ribosomal protein S22

40S ribosomal protein S16

40S ribosomal protein S20

40S ribosomal protein S14-A

40S ribosomal protein S23

40S ribosomal protein S18

40S ribosomal protein S29-B

40S ribosomal protein S13

40S ribosomal protein S11

40S ribosomal protein S15

60S ribosomal protein L1

60S ribosomal protein L2

60S ribosomal protein L3

60S ribosomal protein L4-B

60S ribosomal protein L5

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

60S ribosomal protein L10

60S ribosomal protein L11

60S ribosomal protein L12

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18

60S ribosomal protein L19

60S ribosomal protein L21-A

60S ribosomal protein L23

60S ribosomal protein L24-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L28

60S ribosomal protein L32

60S ribosomal protein L31

60S ribosomal protein L35

60S ribosomal protein L37-A

60S ribosomal protein L42

60S ribosomal protein L43

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