SMTL ID : 4v4b.1

Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Spahn, C.M. et al., Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation. Embo J. (2004)

Release Date

2014-07-09

Peptides

Elongation factor 2: B
40S ribosomal protein S0-A: C
40S ribosomal protein S3: D
40S ribosomal protein S9-A: E
40S ribosomal protein S2: F
40S ribosomal protein S5: G
40S ribosomal protein S22: H
40S ribosomal protein S16: I
40S ribosomal protein S20: J
40S ribosomal protein S14-A: K
40S ribosomal protein S23: L
40S ribosomal protein S18: M
40S ribosomal protein S29-B: N
40S ribosomal protein S13: O
40S ribosomal protein S11: P
40S ribosomal protein S15: Q
60S ribosomal protein L1: T
60S ribosomal protein L2: U
60S ribosomal protein L3: V
60S ribosomal protein L4-B: W
60S ribosomal protein L5: X
60S ribosomal protein L7-A: Y
60S ribosomal protein L8-A: Z
60S ribosomal protein L9-A: 0
60S ribosomal protein L10: 1
60S ribosomal protein L11: 2
60S ribosomal protein L12: 3
60S ribosomal protein L15-A: 4
60S ribosomal protein L16-A: 5
60S ribosomal protein L17-A: 6
60S ribosomal protein L18: 7
60S ribosomal protein L19: 8
60S ribosomal protein L21-A: 9
60S ribosomal protein L23: a
60S ribosomal protein L24-A: b
60S ribosomal protein L25: c
60S ribosomal protein L26-A: d
60S ribosomal protein L28: e
60S ribosomal protein L32: f
60S ribosomal protein L31: g
60S ribosomal protein L35: h
60S ribosomal protein L37-A: i
60S ribosomal protein L42: j
60S ribosomal protein L43: k

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
AT

C
AB

D
AC

E
AD

F
AE

G
AG

H
AH

I
AI

J
AJ

K
AK

L
AL

M
AM

N
AN

O
AO

P
AQ

Q
AS

T
BA

U
BB

V
BC

W
BD

X
BE

Y
BF

Z
BG

0
BH

1
BI

2
BJ

3
BK

4
BL

5
BM

6
BN

7
BO

8
BP

9
BQ

a
BR

b
BS

c
BT

d
BU

e
BV

f
B0

g
BW

h
BX

i
BY

j
BZ

k
B9

Elongation factor 2

40S ribosomal protein S0-A

40S ribosomal protein S3

40S ribosomal protein S9-A

40S ribosomal protein S2

40S ribosomal protein S5

40S ribosomal protein S22

40S ribosomal protein S16

40S ribosomal protein S20

40S ribosomal protein S14-A

40S ribosomal protein S23

40S ribosomal protein S18

40S ribosomal protein S29-B

40S ribosomal protein S13

40S ribosomal protein S11

40S ribosomal protein S15

60S ribosomal protein L1

60S ribosomal protein L2

60S ribosomal protein L3

60S ribosomal protein L4-B

60S ribosomal protein L5

60S ribosomal protein L7-A

60S ribosomal protein L8-A

60S ribosomal protein L9-A

60S ribosomal protein L10

60S ribosomal protein L11

60S ribosomal protein L12

60S ribosomal protein L15-A

60S ribosomal protein L16-A

60S ribosomal protein L17-A

60S ribosomal protein L18

60S ribosomal protein L19

60S ribosomal protein L21-A

60S ribosomal protein L23

60S ribosomal protein L24-A

60S ribosomal protein L25

60S ribosomal protein L26-A

60S ribosomal protein L28

60S ribosomal protein L32

60S ribosomal protein L31

60S ribosomal protein L35

60S ribosomal protein L37-A

60S ribosomal protein L42

60S ribosomal protein L43

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