SMTL ID : 1nd2.4 (3 other biounits)

The structure of Rhinovirus 16

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: H.134 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.134

2 x MYR: MYRISTIC ACID(Non-covalent)

MYR.2: 14 residues within 4Å: Chain A: I.77, I.98, N.99, L.100, Q.101, F.118, S.120, I.122, L.181, Y.190, N.212, L.217, H.238, H.260 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.77, A:I.98, A:I.98, A:F.118, A:I.122, A:I.122, A:L.181, A:Y.190, A:Y.190, A:L.217 Hydrogen bonds: A:L.100, A:Q.101, A:N.212 Salt bridges: A:H.260 MYR.3: 3 residues within 4Å: Chain D: G.1, I.29, N.30 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:I.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds. J.Virol. (2004)

Release Date

2003-12-16

Peptides

coat protein VP1: A
coat protein VP2: B
coat protein VP3: C
coat protein VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

coat protein VP1

coat protein VP2

coat protein VP3

coat protein VP4

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