SMTL ID : 1qju.4 (3 other biounits)

HUMAN RHINOVIRUS 16 COAT PROTEIN IN COMPLEX WITH ANTIVIRAL COMPOUND VP61209

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: H.134 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.134

1 x W01: 2,6-DIMETHYL-1-(3-[3-METHYL-5-ISOXAZOLYL]-PROPANYL)-4-[2N-METHYL-2H-TETRAZOL-5-YL]-PHENOL(Non-covalent)

W01.2: 15 residues within 4Å: Chain A: I.77, I.98, L.100, I.122, M.124, Y.142, Y.144, A.166, V.168, F.179, L.181, L.184, Y.190, M.214, L.217 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.77, A:I.98, A:L.100, A:I.122, A:Y.144, A:Y.144, A:L.181, A:L.184, A:Y.190 Water bridges: A:N.212 pi-Stacking: A:Y.190

1 x MYR: MYRISTIC ACID(Covalent)

MYR.3: 2 residues within 4Å: Chain D: G.1, N.30 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hadfield, A.T. et al., Analysis of Three Structurally Related Antiviral Compounds in Complex with Human Rhinovirus 16. Proc.Natl.Acad.Sci.USA (1999)

Release Date

1999-07-20

Peptides

PROTEIN VP1: A
PROTEIN VP2: B
PROTEIN VP3: C
PROTEIN VP4: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
1

B
2

C
3

D
4

PROTEIN VP1

PROTEIN VP2

PROTEIN VP3

PROTEIN VP4

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