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SMTL ID : 1ojd.4
(4 other biounits)
HUMAN MONOAMINE OXIDASE B IN COMPLEX WITH Lauryldimethylamine-N-oxide (LDAO)
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 3.10 Å
Oligo State
homo-dimer
Ligands
2 x
FAD
:
FLAVIN-ADENINE DINUCLEOTIDE
(Covalent)
FAD.1:
35 residues within 4Å:
Chain A:
V.10
,
G.11
,
G.12
,
G.13
,
I.14
,
S.15
,
L.33
,
E.34
,
A.35
,
R.36
,
G.40
,
G.41
,
R.42
,
T.43
,
G.57
,
G.58
,
S.59
,
Y.60
,
R.233
,
P.234
,
V.235
,
A.263
,
I.264
,
V.294
,
W.388
,
Y.393
,
C.397
,
Y.398
,
G.425
,
T.426
,
G.434
,
Y.435
,
M.436
,
A.439
Ligands:
LDA.2
27
PLIP interactions
:
27 interactions with chain A
Hydrophobic interactions:
A:V.294
,
A:W.388
,
A:Y.398
Hydrogen bonds:
A:G.11
,
A:G.12
,
A:G.13
,
A:S.15
,
A:A.35
,
A:R.36
,
A:R.36
,
A:G.40
,
A:R.42
,
A:R.42
,
A:G.58
,
A:S.59
,
A:Y.60
,
A:Y.60
,
A:V.235
,
A:V.235
,
A:T.426
,
A:T.426
,
A:G.434
,
A:M.436
Salt bridges:
A:R.42
,
A:R.42
pi-Stacking:
A:Y.393
,
A:Y.398
FAD.3:
36 residues within 4Å:
Chain B:
V.10
,
G.11
,
G.12
,
G.13
,
I.14
,
S.15
,
L.33
,
E.34
,
A.35
,
R.36
,
G.40
,
G.41
,
R.42
,
T.43
,
G.57
,
G.58
,
S.59
,
Y.60
,
R.233
,
P.234
,
V.235
,
A.263
,
I.264
,
V.294
,
W.388
,
Y.393
,
S.394
,
C.397
,
Y.398
,
G.425
,
T.426
,
G.434
,
Y.435
,
M.436
,
A.439
Ligands:
LDA.4
25
PLIP interactions
:
25 interactions with chain B
Hydrophobic interactions:
B:V.294
,
B:W.388
,
B:Y.398
,
B:Y.398
Hydrogen bonds:
B:G.11
,
B:G.12
,
B:G.13
,
B:S.15
,
B:A.35
,
B:R.36
,
B:R.36
,
B:G.40
,
B:R.42
,
B:G.58
,
B:S.59
,
B:Y.60
,
B:Y.60
,
B:V.235
,
B:V.235
,
B:T.426
,
B:G.434
,
B:M.436
Salt bridges:
B:R.42
,
B:R.42
pi-Stacking:
B:Y.393
2 x
LDA
:
LAURYL DIMETHYLAMINE-N-OXIDE
(Non-covalent)
LDA.2:
11 residues within 4Å:
Chain A:
P.104
,
W.119
,
L.171
,
I.199
,
Q.206
,
I.316
,
Y.326
,
F.343
,
Y.398
,
Y.435
Ligands:
FAD.1
7
PLIP interactions
:
7 interactions with chain A
Hydrophobic interactions:
A:W.119
,
A:L.171
,
A:L.171
,
A:I.199
,
A:I.316
,
A:Y.326
pi-Cation interactions:
A:Y.398
LDA.4:
10 residues within 4Å:
Chain B:
W.119
,
L.171
,
I.199
,
Q.206
,
I.316
,
Y.326
,
F.343
,
Y.398
,
Y.435
Ligands:
FAD.3
8
PLIP interactions
:
8 interactions with chain B
Hydrophobic interactions:
B:W.119
,
B:L.171
,
B:L.171
,
B:I.199
,
B:I.199
,
B:I.316
,
B:Y.326
pi-Cation interactions:
B:Y.398
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Binda, C. et al., Insights Into the Mode of Inhibition of Human Mitochondrial Monoamine Oxidase B from High-Resolution Crystal Structures. Proc.Natl.Acad.Sci.USA (2003)
Release Date
2003-08-15
Peptides
AMINE OXIDASE [FLAVIN-CONTAINING] B:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
G
B
H
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AMINE OXIDASE [FLAVIN-CONTAINING] B
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