SMTL ID : 1ojd.5 (4 other biounits)

HUMAN MONOAMINE OXIDASE B IN COMPLEX WITH Lauryldimethylamine-N-oxide (LDAO)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.1: 36 residues within 4Å: Chain A: V.10, G.11, G.12, G.13, I.14, S.15, L.33, E.34, A.35, R.36, G.40, G.41, R.42, T.43, G.57, G.58, S.59, Y.60, R.233, P.234, V.235, A.263, I.264, V.294, W.388, Y.393, S.394, C.397, Y.398, G.425, T.426, G.434, Y.435, M.436, A.439 Ligands: LDA.2 27 PLIP interactions: 27 interactions with chain A Hydrophobic interactions: A:V.294, A:W.388, A:Y.398, A:Y.398 Hydrogen bonds: A:G.11, A:G.12, A:G.13, A:S.15, A:A.35, A:R.36, A:R.36, A:G.40, A:R.42, A:R.42, A:G.58, A:S.59, A:Y.60, A:Y.60, A:V.235, A:V.235, A:T.426, A:T.426, A:G.434, A:M.436 Salt bridges: A:R.42, A:R.42 pi-Stacking: A:Y.393 FAD.3: 35 residues within 4Å: Chain B: V.10, G.11, G.12, G.13, I.14, S.15, L.33, E.34, A.35, R.36, G.40, G.41, R.42, T.43, G.57, G.58, S.59, Y.60, R.233, P.234, V.235, A.263, I.264, V.294, W.388, Y.393, C.397, Y.398, G.425, T.426, G.434, Y.435, M.436, A.439 Ligands: LDA.4 26 PLIP interactions: 26 interactions with chain B Hydrophobic interactions: B:V.294, B:W.388, B:Y.398 Hydrogen bonds: B:G.11, B:G.12, B:G.13, B:I.14, B:S.15, B:A.35, B:R.36, B:R.36, B:G.40, B:R.42, B:R.42, B:S.59, B:Y.60, B:Y.60, B:V.235, B:V.235, B:T.426, B:G.434, B:M.436 Salt bridges: B:R.42, B:R.42 pi-Stacking: B:Y.393, B:Y.398

2 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)

LDA.2: 10 residues within 4Å: Chain A: W.119, L.164, L.171, I.199, Q.206, Y.326, F.343, Y.398, Y.435 Ligands: FAD.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.119, A:L.164, A:L.171, A:L.171, A:I.199, A:Y.326 pi-Cation interactions: A:Y.398 LDA.4: 11 residues within 4Å: Chain B: P.104, W.119, L.164, L.171, I.199, Q.206, Y.326, F.343, Y.398, Y.435 Ligands: FAD.3 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:W.119, B:L.164, B:L.171, B:L.171, B:I.199, B:Y.326 pi-Cation interactions: B:Y.398

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Binda, C. et al., Insights Into the Mode of Inhibition of Human Mitochondrial Monoamine Oxidase B from High-Resolution Crystal Structures. Proc.Natl.Acad.Sci.USA (2003)

Release Date

2003-08-15

Peptides

AMINE OXIDASE [FLAVIN-CONTAINING] B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
L

AMINE OXIDASE [FLAVIN-CONTAINING] B

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