- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x GCP: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 2 residues within 4Å:- Chain A: T.112
- Ligands: GCP.1
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:T.112, H2O.8, H2O.8, H2O.10
MG.16: 3 residues within 4Å:- Chain B: T.115, R.141
- Ligands: GCP.15
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:T.115, H2O.17, H2O.19, H2O.22
- 2 x BZP: N1-CARBOXYPIPERAZINE(Non-covalent)
BZP.3: 10 residues within 4Å:- Chain A: L.247, A.270, V.272, E.280, P.281, F.282, Y.283, R.286, R.290
- Ligands: SO4.8
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:E.280, A:Y.283, A:Y.283, A:R.290
- Water bridges: A:R.286
BZP.4: 3 residues within 4Å:- Chain A: K.96, D.97, R.98
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.97, A:R.98
- 11 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 2 residues within 4Å:- Chain A: G.20, R.21
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:R.21
- Water bridges: A:R.21, A:R.21
- Salt bridges: A:R.21
SO4.6: 3 residues within 4Å:- Chain A: R.32, R.35, R.49
8 PLIP interactions:8 interactions with chain A- Water bridges: A:K.28, A:K.28, A:R.32, A:R.32, A:R.49
- Salt bridges: A:R.32, A:R.35, A:R.49
SO4.7: 5 residues within 4Å:- Chain A: P.139, A.140, A.141, R.142, E.143
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:A.140, A:A.141, A:R.142, A:E.143
- Water bridges: A:E.143
- Salt bridges: A:R.142
SO4.8: 3 residues within 4Å:- Chain A: R.286, R.290
- Ligands: BZP.3
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:R.286, A:R.290
SO4.9: 4 residues within 4Å:- Chain A: S.67, L.68, T.69, V.73
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.68, A:T.69
- Water bridges: A:T.69
SO4.10: 4 residues within 4Å:- Chain A: S.164, E.166, S.167, R.170
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.164, A:S.164
- Water bridges: A:S.164, A:S.164
- Salt bridges: A:R.170
SO4.11: 2 residues within 4Å:- Chain A: R.128, R.181
2 PLIP interactions:2 interactions with chain A- Salt bridges: A:R.128, A:R.181
SO4.12: 3 residues within 4Å:- Chain A: E.166, R.169, R.170
4 PLIP interactions:4 interactions with chain A- Water bridges: A:R.169, A:R.169
- Salt bridges: A:R.169, A:R.170
SO4.13: 1 residues within 4Å:- Chain A: R.231
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.231
- Salt bridges: A:R.231
SO4.14: 3 residues within 4Å:- Chain A: R.142, M.160, D.161
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.161, A:D.161
- Salt bridges: A:R.142
SO4.17: 3 residues within 4Å:- Chain B: R.123, R.154, P.285
3 PLIP interactions:3 interactions with chain B- Water bridges: B:R.154
- Salt bridges: B:R.123, B:R.154
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.18: 8 residues within 4Å:- Chain A: L.106, L.192, Q.193, V.229
- Chain B: V.230, G.258, T.259, A.260
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:T.259, B:T.259, B:A.260, A:Q.193
EDO.19: 2 residues within 4Å:- Chain B: K.214
- Ligands: EDO.20
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.214
EDO.20: 3 residues within 4Å:- Chain B: Y.173, K.214
- Ligands: EDO.19
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.214
- Water bridges: B:A.170
EDO.21: 4 residues within 4Å:- Chain A: P.139
- Chain B: E.150, W.151, R.154
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.154
- Water bridges: B:E.150, B:E.150
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Focia, P.J. et al., Heterodimeric Gtpase Core of the Srp Targeting Complex. Science (2004)
- Release Date
- 2004-01-19
- Peptides
- SIGNAL RECOGNITION PARTICLE PROTEIN: A
CELL DIVISION PROTEIN FTSY: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 2 x GCP: PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x BZP: N1-CARBOXYPIPERAZINE(Non-covalent)
- 11 x SO4: SULFATE ION(Non-functional Binders)
- 4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Focia, P.J. et al., Heterodimeric Gtpase Core of the Srp Targeting Complex. Science (2004)
- Release Date
- 2004-01-19
- Peptides
- SIGNAL RECOGNITION PARTICLE PROTEIN: A
CELL DIVISION PROTEIN FTSY: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
D