- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x FUL: beta-L-fucopyranose(Non-covalent)
- 4 x FUC: alpha-L-fucopyranose(Non-covalent)
FUC.2: 13 residues within 4Å:- Chain A: N.21, S.22, S.23, E.95, D.96, G.97, D.99, D.101, D.104
- Chain B: G.114
- Ligands: FUL.1, CA.3, CA.4
10 PLIP interactions:1 interactions with chain B, 9 interactions with chain A- Hydrogen bonds: B:G.114, A:S.23, A:D.96, A:D.104
- Water bridges: A:S.23, A:S.23, A:S.23, A:S.23, A:E.95, A:D.96
FUC.6: 11 residues within 4Å:- Chain A: G.114
- Chain B: N.21, S.22, S.23, E.95, D.96, D.99, D.101, D.104
- Ligands: CA.7, CA.8
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:S.23, B:G.24, B:D.96, B:D.96, B:D.104, A:G.114
- Water bridges: B:S.22, B:D.99
FUC.9: 12 residues within 4Å:- Chain C: N.21, S.22, S.23, E.95, D.96, G.97, D.99, D.101, D.104
- Chain D: G.114
- Ligands: CA.10, CA.11
5 PLIP interactions:4 interactions with chain C, 1 interactions with chain D- Hydrogen bonds: C:S.23, C:D.96, C:D.96, C:D.101, D:G.114
FUC.14: 13 residues within 4Å:- Chain C: G.114
- Chain D: N.21, S.22, S.23, E.95, D.96, G.97, D.99, D.101, D.104
- Ligands: FUL.12, CA.13, CA.15
8 PLIP interactions:1 interactions with chain C, 7 interactions with chain D- Hydrogen bonds: C:G.114, D:S.23, D:D.96
- Water bridges: D:S.23, D:S.23, D:E.95, D:D.96, D:D.99
- 8 x CA: CALCIUM ION(Non-covalent)
CA.3: 7 residues within 4Å:- Chain A: E.95, D.99, D.101, D.104
- Ligands: FUL.1, FUC.2, CA.4
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:E.95, A:E.95, A:D.99, A:D.101, A:D.104
CA.4: 8 residues within 4Å:- Chain A: N.21, D.101, N.103, D.104
- Chain B: G.114
- Ligands: FUL.1, FUC.2, CA.3
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Metal complexes: B:G.114, A:N.21, A:D.101, A:D.104
CA.7: 6 residues within 4Å:- Chain B: E.95, D.99, D.101, D.104
- Ligands: FUC.6, CA.8
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:E.95, B:E.95, B:D.99, B:D.101, B:D.104
CA.8: 7 residues within 4Å:- Chain A: G.114
- Chain B: N.21, D.101, N.103, D.104
- Ligands: FUC.6, CA.7
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Metal complexes: B:N.21, B:D.101, B:D.104, A:G.114
CA.10: 6 residues within 4Å:- Chain C: E.95, D.99, D.101, D.104
- Ligands: FUC.9, CA.11
5 PLIP interactions:5 interactions with chain C- Metal complexes: C:E.95, C:E.95, C:D.99, C:D.101, C:D.104
CA.11: 7 residues within 4Å:- Chain C: N.21, D.101, N.103, D.104
- Chain D: G.114
- Ligands: FUC.9, CA.10
4 PLIP interactions:3 interactions with chain C, 1 interactions with chain D- Metal complexes: C:N.21, C:D.101, C:D.104, D:G.114
CA.13: 7 residues within 4Å:- Chain D: E.95, D.99, D.101, D.104
- Ligands: FUL.12, FUC.14, CA.15
5 PLIP interactions:5 interactions with chain D- Metal complexes: D:E.95, D:E.95, D:D.99, D:D.101, D:D.104
CA.15: 8 residues within 4Å:- Chain C: G.114
- Chain D: N.21, D.101, N.103, D.104
- Ligands: FUL.12, CA.13, FUC.14
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain C- Metal complexes: D:N.21, D:D.101, D:D.104, C:G.114
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loris, R. et al., Structural Basis of Carbohydrate Recognition by the Lectin LecB from Pseudomonas aeruginosa. J.MOL.BIOL. (2003)
- Release Date
- 2003-09-09
- Peptides
- hypothetical protein LecB: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.20 Å
- Oligo State
- homo-tetramer
- Ligands
- 2 x FUL: beta-L-fucopyranose(Non-covalent)
- 4 x FUC: alpha-L-fucopyranose(Non-covalent)
- 8 x CA: CALCIUM ION(Non-covalent)
- 1 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Loris, R. et al., Structural Basis of Carbohydrate Recognition by the Lectin LecB from Pseudomonas aeruginosa. J.MOL.BIOL. (2003)
- Release Date
- 2003-09-09
- Peptides
- hypothetical protein LecB: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D