- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
- 6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.3: 4 residues within 4Å:- Chain A: K.105, N.106, N.188, K.190
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:N.106
- Hydrogen bonds: A:N.188
- Water bridges: A:N.106, A:N.188, A:K.190, A:K.190, A:K.190
NAG.4: 2 residues within 4Å:- Chain A: R.14, N.57
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.14
NAG.5: 4 residues within 4Å:- Chain A: R.465, K.469, E.482, N.485
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:K.469, A:E.482
- Hydrogen bonds: A:N.485
- Water bridges: A:R.465
NAG.17: 4 residues within 4Å:- Chain B: K.105, N.106, N.188, K.190
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:N.106
- Hydrogen bonds: B:N.188
- Water bridges: B:N.106, B:N.188, B:K.190, B:K.190, B:K.190
NAG.18: 2 residues within 4Å:- Chain B: R.14, N.57
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:R.14
NAG.19: 4 residues within 4Å:- Chain B: R.465, K.469, E.482, N.485
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:K.469, B:E.482
- Hydrogen bonds: B:N.485
- Water bridges: B:R.465
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.6: 4 residues within 4Å:- Chain A: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.316, A:N.414, A:N.415
SO4.7: 2 residues within 4Å:- Chain A: R.520, F.521
1 PLIP interactions:1 interactions with chain A- Water bridges: A:R.520
SO4.20: 4 residues within 4Å:- Chain B: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.316, B:N.414, B:N.415
SO4.21: 2 residues within 4Å:- Chain B: R.520, F.521
1 PLIP interactions:1 interactions with chain B- Water bridges: B:R.520
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.8: 3 residues within 4Å:- Chain A: E.80
- Chain B: E.80
- Ligands: CL.22
Ligand excluded by PLIPCL.9: 2 residues within 4Å:- Chain A: T.488, T.508
Ligand excluded by PLIPCL.22: 3 residues within 4Å:- Chain A: E.80
- Chain B: E.80
- Ligands: CL.8
Ligand excluded by PLIPCL.23: 2 residues within 4Å:- Chain B: T.488, T.508
Ligand excluded by PLIP- 2 x BUA: butanoic acid(Non-covalent)
BUA.10: 9 residues within 4Å:- Chain A: G.116, G.117, S.198, A.199, W.231, L.286, F.398, H.438
- Ligands: GOL.14
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:W.231, A:F.398
- Hydrogen bonds: A:G.116, A:G.117, A:S.198, A:A.199
- Salt bridges: A:H.438
BUA.24: 9 residues within 4Å:- Chain B: G.116, G.117, S.198, A.199, W.231, L.286, F.398, H.438
- Ligands: GOL.28
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:W.231, B:F.398
- Hydrogen bonds: B:G.116, B:G.117, B:S.198, B:A.199
- Salt bridges: B:H.438
- 2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
MES.11: 5 residues within 4Å:- Chain A: K.323, Y.420, L.514, R.515, Q.518
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:K.323, A:R.515, A:R.515, A:R.515
- Water bridges: A:R.515, A:A.516, A:A.516, A:Q.518
- Salt bridges: A:R.515
MES.25: 5 residues within 4Å:- Chain B: K.323, Y.420, L.514, R.515, Q.518
11 PLIP interactions:11 interactions with chain B- Hydrogen bonds: B:K.323, B:Y.420, B:R.515, B:R.515, B:R.515
- Water bridges: B:Y.500, B:R.515, B:A.516, B:A.516, B:Q.518
- Salt bridges: B:R.515
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.12: 6 residues within 4Å:- Chain A: L.18, L.29, Y.61, W.98, D.129, K.131
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:W.98, A:K.131, A:K.131
- Water bridges: A:D.129
GOL.13: 5 residues within 4Å:- Chain A: W.231, T.234, E.238, R.242, V.288
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:W.231, A:R.242, A:R.242, A:V.288, A:V.288
- Water bridges: A:P.230
GOL.14: 5 residues within 4Å:- Chain A: W.82, G.115, G.116, E.197
- Ligands: BUA.10
6 PLIP interactions:6 interactions with chain A- Water bridges: A:W.82, A:G.115, A:G.116, A:T.120, A:T.120, A:Y.128
GOL.26: 6 residues within 4Å:- Chain B: L.18, L.29, Y.61, W.98, D.129, K.131
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:W.98, B:K.131, B:K.131
- Water bridges: B:Y.61
GOL.27: 5 residues within 4Å:- Chain B: W.231, T.234, E.238, R.242, V.288
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:W.231, B:R.242, B:R.242, B:V.288, B:V.288
- Water bridges: B:P.230
GOL.28: 5 residues within 4Å:- Chain B: W.82, G.115, G.116, E.197
- Ligands: BUA.24
6 PLIP interactions:6 interactions with chain B- Water bridges: B:W.82, B:G.115, B:G.116, B:T.120, B:T.120, B:Y.128
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nicolet, Y. et al., Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products. J.Biol.Chem. (2003)
- Release Date
- 2003-08-05
- Peptides
- Cholinesterase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
- 6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x BUA: butanoic acid(Non-covalent)
- 2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nicolet, Y. et al., Crystal structure of human butyrylcholinesterase and of its complexes with substrate and products. J.Biol.Chem. (2003)
- Release Date
- 2003-08-05
- Peptides
- Cholinesterase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A