- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 16 x NAG- NAG- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 8 x NAG- FUL: beta-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG-FUL.2: 3 residues within 4Å:- Chain A: N.106, N.188, K.190
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain D- Hydrogen bonds: A:N.188, A:N.188
- Water bridges: A:T.108, D:Q.311
- Hydrophobic interactions: A:N.106
NAG-FUL.12: 3 residues within 4Å:- Chain B: N.106, N.188, K.190
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain B- Water bridges: C:Q.311, B:T.108
- Hydrogen bonds: B:N.188, B:N.188
- Hydrophobic interactions: B:N.106
NAG-FUL.22: 3 residues within 4Å:- Chain C: N.106, N.188, K.190
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain C- Water bridges: A:Q.311, C:T.108
- Hydrogen bonds: C:N.188, C:N.188
- Hydrophobic interactions: C:N.106
NAG-FUL.32: 3 residues within 4Å:- Chain D: N.106, N.188, K.190
3 PLIP interactions:2 interactions with chain D, 1 interactions with chain B- Hydrogen bonds: D:N.188, D:N.188
- Water bridges: D:T.108, B:Q.311
- Hydrophobic interactions: D:N.106
NAG-FUL.42: 3 residues within 4Å:- Chain E: N.106, N.188, K.190
3 PLIP interactions:1 interactions with chain H, 2 interactions with chain E- Water bridges: H:Q.311
- Hydrogen bonds: E:N.188, E:N.188
- Hydrophobic interactions: E:N.106
NAG-FUL.52: 3 residues within 4Å:- Chain F: N.106, N.188, K.190
3 PLIP interactions:2 interactions with chain F, 1 interactions with chain G- Hydrogen bonds: F:N.188, F:N.188
- Water bridges: G:Q.311
- Hydrophobic interactions: F:N.106
NAG-FUL.62: 3 residues within 4Å:- Chain G: N.106, N.188, K.190
3 PLIP interactions:1 interactions with chain E, 2 interactions with chain G- Water bridges: E:Q.311
- Hydrogen bonds: G:N.188, G:N.188
- Hydrophobic interactions: G:N.106
NAG-FUL.72: 3 residues within 4Å:- Chain H: N.106, N.188, K.190
3 PLIP interactions:2 interactions with chain H, 1 interactions with chain F- Hydrogen bonds: H:N.188, H:N.188
- Water bridges: F:Q.311
- Hydrophobic interactions: H:N.106
- 24 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.4: 2 residues within 4Å:- Chain A: R.14, N.57
Ligand excluded by PLIPNAG.5: 4 residues within 4Å:- Chain A: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.6: 1 residues within 4Å:- Chain A: N.256
Ligand excluded by PLIPNAG.14: 2 residues within 4Å:- Chain B: R.14, N.57
Ligand excluded by PLIPNAG.15: 4 residues within 4Å:- Chain B: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.16: 1 residues within 4Å:- Chain B: N.256
Ligand excluded by PLIPNAG.24: 2 residues within 4Å:- Chain C: R.14, N.57
Ligand excluded by PLIPNAG.25: 4 residues within 4Å:- Chain C: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.26: 1 residues within 4Å:- Chain C: N.256
Ligand excluded by PLIPNAG.34: 2 residues within 4Å:- Chain D: R.14, N.57
Ligand excluded by PLIPNAG.35: 4 residues within 4Å:- Chain D: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.36: 1 residues within 4Å:- Chain D: N.256
Ligand excluded by PLIPNAG.44: 2 residues within 4Å:- Chain E: R.14, N.57
Ligand excluded by PLIPNAG.45: 4 residues within 4Å:- Chain E: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.46: 1 residues within 4Å:- Chain E: N.256
Ligand excluded by PLIPNAG.54: 2 residues within 4Å:- Chain F: R.14, N.57
Ligand excluded by PLIPNAG.55: 4 residues within 4Å:- Chain F: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.56: 1 residues within 4Å:- Chain F: N.256
Ligand excluded by PLIPNAG.64: 2 residues within 4Å:- Chain G: R.14, N.57
Ligand excluded by PLIPNAG.65: 4 residues within 4Å:- Chain G: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.66: 1 residues within 4Å:- Chain G: N.256
Ligand excluded by PLIPNAG.74: 2 residues within 4Å:- Chain H: R.14, N.57
Ligand excluded by PLIPNAG.75: 4 residues within 4Å:- Chain H: R.465, K.469, E.482, N.485
Ligand excluded by PLIPNAG.76: 1 residues within 4Å:- Chain H: N.256
Ligand excluded by PLIP- 8 x NA: SODIUM ION(Non-functional Binders)
NA.7: 3 residues within 4Å:- Chain A: F.525
- Chain F: F.525
- Ligands: NA.57
No protein-ligand interaction detected (PLIP)NA.17: 3 residues within 4Å:- Chain B: F.525
- Chain E: F.525
- Ligands: NA.47
No protein-ligand interaction detected (PLIP)NA.27: 3 residues within 4Å:- Chain C: F.525
- Chain G: F.525
- Ligands: NA.67
No protein-ligand interaction detected (PLIP)NA.37: 3 residues within 4Å:- Chain D: F.525
- Chain H: F.525
- Ligands: NA.77
No protein-ligand interaction detected (PLIP)NA.47: 3 residues within 4Å:- Chain B: F.525
- Chain E: F.525
- Ligands: NA.17
No protein-ligand interaction detected (PLIP)NA.57: 3 residues within 4Å:- Chain A: F.525
- Chain F: F.525
- Ligands: NA.7
No protein-ligand interaction detected (PLIP)NA.67: 3 residues within 4Å:- Chain C: F.525
- Chain G: F.525
- Ligands: NA.27
No protein-ligand interaction detected (PLIP)NA.77: 3 residues within 4Å:- Chain D: F.525
- Chain H: F.525
- Ligands: NA.37
No protein-ligand interaction detected (PLIP)- 16 x CL: CHLORIDE ION(Non-functional Binders)
CL.8: 3 residues within 4Å:- Chain A: S.487, T.488, T.508
Ligand excluded by PLIPCL.9: 1 residues within 4Å:- Chain A: R.347
Ligand excluded by PLIPCL.18: 3 residues within 4Å:- Chain B: S.487, T.488, T.508
Ligand excluded by PLIPCL.19: 1 residues within 4Å:- Chain B: R.347
Ligand excluded by PLIPCL.28: 3 residues within 4Å:- Chain C: S.487, T.488, T.508
Ligand excluded by PLIPCL.29: 1 residues within 4Å:- Chain C: R.347
Ligand excluded by PLIPCL.38: 3 residues within 4Å:- Chain D: S.487, T.488, T.508
Ligand excluded by PLIPCL.39: 1 residues within 4Å:- Chain D: R.347
Ligand excluded by PLIPCL.48: 3 residues within 4Å:- Chain E: S.487, T.488, T.508
Ligand excluded by PLIPCL.49: 1 residues within 4Å:- Chain E: R.347
Ligand excluded by PLIPCL.58: 3 residues within 4Å:- Chain F: S.487, T.488, T.508
Ligand excluded by PLIPCL.59: 1 residues within 4Å:- Chain F: R.347
Ligand excluded by PLIPCL.68: 3 residues within 4Å:- Chain G: S.487, T.488, T.508
Ligand excluded by PLIPCL.69: 1 residues within 4Å:- Chain G: R.347
Ligand excluded by PLIPCL.78: 3 residues within 4Å:- Chain H: S.487, T.488, T.508
Ligand excluded by PLIPCL.79: 1 residues within 4Å:- Chain H: R.347
Ligand excluded by PLIP- 8 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.10: 4 residues within 4Å:- Chain A: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.316, A:N.414, A:N.415
PO4.20: 4 residues within 4Å:- Chain B: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.316, B:N.414, B:N.415
PO4.30: 4 residues within 4Å:- Chain C: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:Q.316, C:N.414, C:N.415
PO4.40: 4 residues within 4Å:- Chain D: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:Q.316, D:N.414, D:N.415
PO4.50: 4 residues within 4Å:- Chain E: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:Q.316, E:N.414, E:N.415
PO4.60: 4 residues within 4Å:- Chain F: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:Q.316, F:N.414, F:N.415
PO4.70: 4 residues within 4Å:- Chain G: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain G- Hydrogen bonds: G:Q.316, G:N.414, G:N.415
PO4.80: 4 residues within 4Å:- Chain H: Q.316, G.413, N.414, N.415
3 PLIP interactions:3 interactions with chain H- Hydrogen bonds: H:Q.316, H:N.414, H:N.415
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carletti, E. et al., Aging of Cholinesterases Phosphylated by Tabun Proceeds through O-Dealkylation. J.Am.Chem.Soc. (2008)
- Release Date
- 2008-12-02
- Peptides
- Cholinesterase: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-octamer
- Ligands
- 16 x NAG- NAG- FUL: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 8 x NAG- FUL: beta-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 24 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 8 x NA: SODIUM ION(Non-functional Binders)
- 16 x CL: CHLORIDE ION(Non-functional Binders)
- 8 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carletti, E. et al., Aging of Cholinesterases Phosphylated by Tabun Proceeds through O-Dealkylation. J.Am.Chem.Soc. (2008)
- Release Date
- 2008-12-02
- Peptides
- Cholinesterase: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A